Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_027386.1 Length=29247 Score E Sequences producing significant alignments: (Bits) Value seq613 329 6e-86 >seq613 Length=305 Score = 329 bits (364), Expect = 6e-86 Identities = 226/255 (89%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 16660 GCTGGGGCACTATTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCG 16719 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255 GCTGGGGCACTCTTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCG 196 Query 16720 AGTGTCTGTTGTAGGAGTGCACATTCGGCGAGGGTGTCTTCAGCCTGATCGACAATGTTT 16779 |||||||| |||||||||||||||||||||||||||| || |||||| |||||| ||||| Sbjct 195 AGTGTCTGGTGTAGGAGTGCACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTGTTT 136 Query 16780 TGTTTTGCTACGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCT 16839 | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 135 CGCGGGATGATGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCT 76 Query 16840 GCCATGATTTGTAGTGTTAGGGCCTGGTTGGTGATGCATTCCAGCTCGTCTAGGGCGGCC 16899 |||||| | ||| |||| ||||||| ||||| | ||||||| |||| ||||| ||| Sbjct 75 GCCATGGTGGCGAGTTTTAGTGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCTGCC 16 Query 16900 TGGCTAGCCTCCGGC 16914 ||||||||||||||| Sbjct 15 TGGCTAGCCTCCGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93465153840530