Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_027389.1 Length=29494 Score E Sequences producing significant alignments: (Bits) Value seq613 324 3e-84 >seq613 Length=305 Score = 324 bits (358), Expect = 3e-84 Identities = 224/254 (88%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 16709 GCTGGGGCACTATTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCG 16768 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255 GCTGGGGCACTCTTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCG 196 Query 16769 AGTGTCTGTTTTAGGAGTGCACACTCGGCGAGGGTGTCTTCAGCCTGGTCGACAATGTTT 16828 |||||||| | |||||||||||| ||||||||||||| || ||||||||||||| ||||| Sbjct 195 AGTGTCTGGTGTAGGAGTGCACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTGTTT 136 Query 16829 TGTTTTGCTATGCCTGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCT 16888 | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 135 CGCGGGATGATGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCT 76 Query 16889 GCCATGATTTGTAGTGTTAGGGCCTGGTTGGTGATGCATTCCAGCTCGTCTAGGGCGGCC 16948 |||||| | ||| |||| ||||||| ||||| | ||||||| |||| ||||| ||| Sbjct 75 GCCATGGTGGCGAGTTTTAGTGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCTGCC 16 Query 16949 TGGCTAGCCTCCGG 16962 |||||||||||||| Sbjct 15 TGGCTAGCCTCCGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94255523007520