Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_027623.1 Length=29328 Score E Sequences producing significant alignments: (Bits) Value seq613 334 1e-87 >seq613 Length=305 Score = 334 bits (370), Expect = 1e-87 Identities = 227/255 (89%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 16649 GCTGGGGCACTATTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGTATGTCTTCG 16708 ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 255 GCTGGGGCACTCTTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCG 196 Query 16709 AGTGTCTGGTGTAGGAGTGCACATTCGGCGAGGGTGTATTTAGCCTGGTCGACAATGTTT 16768 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct 195 AGTGTCTGGTGTAGGAGTGCACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTGTTT 136 Query 16769 TGTTTTACTATGCCGGGATAGTTGTCTCGATGATCGTGGATGGCTTCCAGAATGTTGTCT 16828 | | ||||||||||||||||| || |||| || |||||||||||||||||||||| Sbjct 135 CGCGGGATGATGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCT 76 Query 16829 ACCATGGTTATGAGTGTTAGGGCCTTGTAGGTGAGGCATTCCAGCCCGTCTAGGGCCGCC 16888 ||||||| |||| |||| |||| |||||||||| |||||||||||| ||||| ||| Sbjct 75 GCCATGGTGGCGAGTTTTAGTGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCTGCC 16 Query 16889 TGGCTAGCCTCTGGC 16903 ||||||||||| ||| Sbjct 15 TGGCTAGCCTCCGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93724343729300