Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_027625.1 Length=29461 Score E Sequences producing significant alignments: (Bits) Value seq613 250 5e-62 >seq613 Length=305 Score = 250 bits (276), Expect = 5e-62 Identities = 237/305 (78%), Gaps = 5/305 (2%) Strand=Plus/Minus Query 16674 ATATAGTTTGTGCCCCAGCGGT-GCTGCCATG---CGTGTGGCGGCTGCTGCTGGGGCAC 16729 ||||||||||||||||||| | || ||| | ||||| || | |||||||||| Sbjct 304 ATATAGTTTGTGCCCCAGCAGCAGCCACCACAAAACACGTGGCAGCACC-GCTGGGGCAC 246 Query 16730 TCTTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTANNNNNNNNNNNNNNNNCTGGT 16789 ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 245 TCTTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTCGAGTGTCTGGT 186 Query 16790 GTAGGAGTGCGCATGCGGCGAGGGTGTCTTCGGCCTGGTCTGCAATATTCTGCCCGGACA 16849 |||||||||| ||| |||||||||||| || |||||||| || | || || | | Sbjct 185 GTAGGAGTGCACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTGTTTCGCGGGATGA 126 Query 16850 CGTCTGGATAGTGGTTTCGGTGATCGTAGATGGCTTCTAGAATGTTGTCTGCCATGTCGG 16909 | | ||||||| || ||||||| |||||||||||| |||||||||||||||||| || Sbjct 125 TGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGTCTGCCATGGTGG 66 Query 16910 CGAGTTTGAGGGCCTGGTAGGTGAGGGATTCGAGGCTGTCTAGGGCCGCCTGGCTATCCT 16969 ||||||| || |||||||||||||||| ||| || | ||| ||||| ||||||||| ||| Sbjct 65 CGAGTTTTAGTGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCTGCCTGGCTAGCCT 6 Query 16970 CCTGC 16974 || || Sbjct 5 CCGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94149927126910