Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1409 122 7e-23 >seq1409 Length=7126 Score = 122 bits (134), Expect = 7e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| |||| |||| || | || | || || || |||||||| ||||||||| Sbjct 468 TGCCTCCACGCAGACGCAGGACAAGGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGG 409 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | | |||| ||||||||||| || ||| | |||||||| || || || |||| Sbjct 408 ACAGCGTCCTGCCGTCCTCGAGCTGTTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGCG 349 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || ||||| || ||||||| | |||| | | || | ||||| ||| ||| | Sbjct 348 GGATGCCTTCTTTGTCCTGGATCTTGGTCTTCACGTTGTCGATGGTGTCGCTGGATTCGA 289 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCAC 27235 | || ||||| || | ||||| |||||||||||||| Sbjct 288 CCTCAAGAGTGATGGTCTTGCCGGTCAGAGTTTTCAC 252 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 || || || |||||||||| |||||||| ||||| || || || || ||||| || Sbjct 697 TTACCGCCTCGCAACCGCAGGACCAAATGCAACGTGCTCTCCTTCTGGATGTTGTAATCA 638 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | || |||| ||||||||||| || || | ||||||||||| || || || Sbjct 637 GACAGCGTCCGGCCGTCCTCGAGCTGTTTTCCTGCAAAGATGAGACGCTGCTGGTCTGGT 578 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||| || || || |||||| | || | | | |||| ||||| ||| ||| Sbjct 577 GGGATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCTATCGTGTCGCTGGATTCT 518 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || | ||||||||| || || || || ||||| ||||| Sbjct 517 ACCTCCAGCGTGATGGTTTTGCCCGTAAGTGTCTTGACGAAGATCTGCAT 468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424917387352920