Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2158 95.1 4e-14 >seq2158 Length=8959 Score = 95.1 bits (104), Expect = 4e-14 Identities = 125/172 (73%), Gaps = 1/172 (1%) Strand=Plus/Minus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||||| | |||| || || || ||||||| ||||| || | || || |||||| Sbjct 2284 CACCTTCGCCCAGCGCCTTGTTGCCTTTGCTGCTGTCGAGGGTATTTTCTTCAGCGGCTC 2225 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 ||| ||||||||||||||| | || |||||||| || |||| ||| || ||||| | Sbjct 2224 CTTC-GCCTCCATCTTCTGGCTAAAGAAGCGTGGTCTCATGCCCGGACTCACCTTCTCCA 2166 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||||||| ||| || ||||| || | || || || ||||| ||||| Sbjct 2165 ACGAACTTATCTCCCGTGACGAAGGCCTACACACTGATTTTGCCTGCCTTCT 2114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588269148426825