Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1409 118 9e-22
>seq1409
Length=7126
Score = 118 bits (130), Expect = 9e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059
|| |||||||||||||||||| | || |||||||| || ||| | |||| | || ||
Sbjct 252 GTGAAAACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAATCCAGCGACACCATCGAC 311
Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119
| || || || || || |||||||||||||| || || || || || ||| | ||
Sbjct 312 AACGTGAAGACCAAGATCCAGGACAAAGAAGGCATCCCGCCAGACCAGCAACGTCTCATC 371
Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179
| ||| || ||||| | || ||| | ||| | ||||| |||||||||||||||||
Sbjct 372 TTCGCTGGAAAACAGCTCGAGGACGGCAGGACGCTGTCCGACTACAACATTCAAAAGGAA 431
Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || | || | || ||||| |||| || |||||
Sbjct 432 TCAACTCTCCACCTTGTCCTGCGTCTGCGTGGAGGCAT 469
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || ||||| | || || || || || ||| |
Sbjct 467 CATGCAGATCTTCGTCAAGACACTTACGGGCAAAACCATCACGCTGGAGGTAGAATCCAG 526
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| |||| || | ||||| ||| || || ||||| ||||| || ||||| || ||
Sbjct 527 CGACACGATAGACAACGTCAAGACAAAGATCCAGGACAAGGAAGGTATCCCACCAGACCA 586
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | || || ||||| | || ||| | ||| | || ||||||||
Sbjct 587 GCAGCGTCTCATCTTTGCAGGAAAACAGCTCGAGGACGGCCGGACGCTGTCTGATTACAA 646
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||| || |||||| || || |||||||| |||| ||||| || ||
Sbjct 647 CATCCAGAAGGAGAGCACGTTGCATTTGGTCCTGCGGTTGCGAGGCGG 694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434900541163200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |