Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_031005.1 Length=29338 Score E Sequences producing significant alignments: (Bits) Value seq613 379 4e-101 >seq613 Length=305 Score = 379 bits (420), Expect = 4e-101 Identities = 240/257 (93%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 16719 GCTGGGGCACACCTTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTC 16778 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255 GCTGGGGCACTC-TTTTTGTGTCTACAGGGGTTTTACAGGTTGTCGTCTAGGGTGTCTTC 197 Query 16779 GAGTGTCTGGTGTAGGAGGGCGCATTCGGCGAGGGTGTTTTTAGCCTGGTCGGCAATGTT 16838 |||||||||||||||||| || |||||||||||||||||||||||||||||| || |||| Sbjct 196 GAGTGTCTGGTGTAGGAGTGCACATTCGGCGAGGGTGTTTTTAGCCTGGTCGACAGTGTT 137 Query 16839 TTCGTTGGATGATGCCGGGATGGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGT 16898 | || ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 136 T-CGCGGGATGATGCCGGGATAGTTGTCGCGGTGATTGTAGATGGCTTCCAGAATGTTGT 78 Query 16899 CTGCCAGGGTGGCGAGTTTTAGGGCCTGGTAGGTGAGGATTTCTAGCTCGTCTAGGGCGG 16958 |||||| ||||||||||||||| ||||||||||||||| |||| ||| |||| ||||| | Sbjct 77 CTGCCATGGTGGCGAGTTTTAGTGCCTGGTAGGTGAGGGTTTCCAGCCCGTCCAGGGCTG 18 Query 16959 CCTGGCTAGCCTCCGGC 16975 ||||||||||||||||| Sbjct 17 CCTGGCTAGCCTCCGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93756342481000