Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1409 96.9 8e-15 >seq1409 Length=7126 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| || |||||||||||||| | | || | || || || || ||| || || || Sbjct 659 CTCCTTCTGGATGTTGTAATCAGACAGCGTCCGGCCGTCCTCGAGCTGTTTTCCTGCAAA 600 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| || | ||||||||| | | ||| |||||||| || || || ||| ||||| | Sbjct 599 GATGAGACGCTGCTGGTCTGGTGGGATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTT 540 Query 152033 CTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTC 152090 |||| |||| || | ||| || || || || || ||||||||||| || ||||| Sbjct 539 GTCTATCGTGTCGCTGGATTCT--ACCTCCAGCGTGATGGTTTTGCCCGTAAGTGTCTTG 482 Query 152091 ACGAAGACCTGCAT 152104 ||||||| |||||| Sbjct 481 ACGAAGATCTGCAT 468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153772236764235