Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq789 304 1e-77
seq2954 206 3e-48
seq639 188 7e-43
seq762 150 2e-31
seq1110 140 3e-28
>seq789
Length=216
Score = 304 bits (336), Expect = 1e-77
Identities = 194/211 (92%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 8380 GATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTC 8439
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 6 GATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTC 65
Query 8440 CAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGT 8499
| |||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 66 CCGAGTAGCTGGGATTACAGGCGTGCACCACCACGCCTGGCTAATTTTTGTATTTTTAGT 125
Query 8500 AGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCC 8559
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 126 AGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCT 185
Query 8560 ACCTGCCTCGGCCTCCCAAAGTGCTGGGATT 8590
|| ||||||||||||||||||||||||||
Sbjct 186 GCCCACCTCGGCCTCCCAAAGTGCTGGGATT 216
>seq2954
Length=299
Score = 206 bits (228), Expect = 3e-48
Identities = 138/153 (90%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403
|||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct 96 TCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCCG 155
Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 156 CCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCAT 215
Query 8464 AAGCCACCACGCCAAGCTAATTTTTGTATTTTT 8496
||||||||||| ||||| |||||||||||
Sbjct 216 GTGCCACCACGCCCGGCTAA--TTTGTATTTTT 246
>seq639
Length=216
Score = 188 bits (208), Expect = 7e-43
Identities = 116/123 (94%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 216 TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 157
Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603
||||||| ||||||| || ||||||||||||||||||||||||||||||||| ||||||
Sbjct 156 TGACCTC--GTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 99
Query 8604 ACC 8606
|||
Sbjct 98 ACC 96
Score = 127 bits (140), Expect = 2e-24
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 8530 TGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGAT 8589
||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1 TGGTCTCGATCTCCTGACCT--TGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGAT 58
Query 8590 TACAGGCATGAGCCACCGCGCCTGGCC 8616
||||||| ||||||||||| |||||||
Sbjct 59 TACAGGCGTGAGCCACCGCACCTGGCC 85
>seq762
Length=231
Score = 150 bits (166), Expect = 2e-31
Identities = 121/146 (83%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 8470 CCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGC 8529
||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 231 CCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGC 172
Query 8530 TGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGAT 8589
|||||| ||||||||| |||| | |||| || |||| ||||||| | |||||||
Sbjct 171 TGGTCTTGAACTCCTGGGCTCAAGCAATCCTCCCACCTCAGCCTCCCGAGTAGCTGGGAC 112
Query 8590 TACAGGCATGAGCCACCGCGCCTGGC 8615
|||||||||| |||| | ||| |||
Sbjct 111 TACAGGCATGTGCCATCATGCCCGGC 86
Score = 93.3 bits (102), Expect = 4e-14
Identities = 99/129 (77%), Gaps = 9/129 (7%)
Strand=Plus/Minus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || |||| ||||||||||| |||||||||||| ||||||||
Sbjct 161 CTCCTGGGCTCAAGCAATCCTCCCACCTCAGCCTCCCGAGTAGCTGGGACTACAGGCATG 102
Query 8465 AGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCAC-CATGTTGG 8523
|||| || ||| |||||||||| |||| |||| | ||||| | | |||||
Sbjct 101 TGCCATCATGCCCGGCTAATTTTT---TTTT-----GAGACGGAGTTTCGCTCTTGTTGC 50
Query 8524 CCAGGCTGG 8532
|||||||||
Sbjct 49 CCAGGCTGG 41
Score = 82.4 bits (90), Expect = 8e-11
Identities = 51/55 (93%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 8352 TGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCT 8406
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 55 TGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAACCTCCGCCT 1
>seq1110
Length=7218
Score = 140 bits (154), Expect = 3e-28
Identities = 111/132 (84%), Gaps = 1/132 (1%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| ||||| || |||| ||||||||||| ||||||||||| |||||||
Sbjct 7087 CTCCTGGGCTCAAGTGATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCC 7146
Query 8465 AGCCACCACGCCAAGCTAA-TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGG 8523
||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| |
Sbjct 7147 CGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAG 7206
Query 8524 CCAGGCTGGTCT 8535
||||| ||||||
Sbjct 7207 CCAGGATGGTCT 7218
Score = 122 bits (134), Expect = 9e-23
Identities = 102/125 (82%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 8491 ATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTC 8550
|||||| ||||||| ||||| |||| |||||| ||||||||||||| |||||||| |||
Sbjct 7038 ATTTTTTGTAGAGATAGGGTCTCACTATGTTGCCCAGGCTGGTCTCAAACTCCTGGGCTC 7097
Query 8551 ATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGC 8610
| ||||||| || |||| ||||||||| ||||||| ||||||| |||||| |||
Sbjct 7098 AAGTGATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGC 7157
Query 8611 CTGGC 8615
| |||
Sbjct 7158 CCGGC 7162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521466586399000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |