Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq15 91.5 1e-13 >seq15 Length=330385 Score = 91.5 bits (100), Expect = 1e-13 Identities = 129/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 19039 TATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCAC 19098 |||||||||||||| | |||||||| || ||||| || |||||||| || |||||| | Sbjct 36437 TATACCAGAGATCGTGTGATATGGGACTGGGGGTGCCCTTCAACATCGCATCATATGCGC 36378 Query 19099 TTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACC-GGAGATTTAATTCATACA 19157 | | || | || | || || | || || || | || ||| ||| |||||||| Sbjct 36377 TGTTGACGCATATGTTTGCTCACGCAGCA-GATTTGCATCCTGGAACTTTTATTCATACC 36319 Query 19158 ATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCTAGCTCG 19216 ||||||||||||||| | ||| | | ||||| || ||| | | | |||||| |||| Sbjct 36318 ATGGGGGATGCACATGTGTACCTTGACCATATTGAAGCTCTGCAGGAGCAGCTTACTCG 36260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399502149797100