Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq109 84.2 2e-11 seq13 82.4 7e-11 >seq109 Length=59048 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 120341 GTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCTTAAGAAAAAATCGTTC 120400 ||| |||||| | || | ||| ||||| || || | ||||| | || |||||||| Sbjct 41239 GTTAACGATGCCATCTGAGGCGGCGAAGAAGGCCAAGACGTGGGAGATGAAGAATCGTTC 41180 Query 120401 TTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACATGTCGATCTCTTCGAC 120460 | || || || | |||||||| |||| || ||||| || | ||| ||||||||| | Sbjct 41179 ATCGTCATTGAGCCTGTTGTTCCAGTCGTGAATATCCTTAGAGAGGTCAATCTCTTCGGC 41120 Query 120461 TTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 ||||| | || | | |||||||||||| |||||||| Sbjct 41119 AGTCCAGAAAGAAGCTTCAGCTTTCTTGTACATTTGCCAGA 41079 >seq13 Length=341173 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 26781 GTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAG 26840 || ||||| | || || || | ||||| | || | ||||| | |||||||||||| Sbjct 273086 GTGAAAACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAATCCAGCGACACCATCGAC 273027 Query 26841 CAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATT 26900 | ||||| ||||| ||||| || || || ||||| || || ||| | ||||| Sbjct 273026 AACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAGCAACGTCTCATC 272967 Query 26901 TACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAA 26960 | | || ||||| ||||| || | | | | || ||||| ||||| ||||| ||| Sbjct 272966 TTTGCAGGAAAACAGCTCGAGGACGGCCGGACCCTCTCGGACTACAACATCCAAAAGGAA 272907 Query 26961 TCTACTATCCATCTGGTCCT 26980 || ||| |||| || ||||| Sbjct 272906 TCAACTCTCCACCTTGTCCT 272887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660126353600