Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq52 102 2e-16 >seq52 Length=166440 Score = 102 bits (112), Expect = 2e-16 Identities = 96/120 (80%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| |||||||| ||||| || ||| ||||| | ||| ||| || || Sbjct 37099 CACTCGCGCATGCGCGGTCTCTCTGGCGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGC 37158 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || ||||||| ||||||| ||||||| ||||||||||| ||||||||||| ||||| || Sbjct 37159 TCC-TGGCAACGCCCTCACCTGATCGTCCTCGACGAGCCAACCAACTATCTCGACCGTGA 37217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027831795719580