Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq71 87.8 2e-12 >seq71 Length=104042 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 157891 GGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 157950 ||||||||||| |||||| ||||| ||||| |||||||| || || ||||| || | Sbjct 50161 GGATACTATGGTACCATCGTGCCCCCGGTCATCCAGCGAAATGTCCTCGAGAACCCCATC 50220 Query 157951 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 158010 |||||||| |||||||| || || | ||||| |||||| | | || || | Sbjct 50221 TGGTACACCAGCTACACTCCTTACCAGCCCGAGATCAGTCAGGGCCGTCTCGAGTCTCTT 50280 Query 158011 TTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTA 158070 |||| | ||| || || | | | || || || || || || | || || || || | Sbjct 50281 CTCAACTTCCAGACCCTTACCTCTGACCTGACCGGTCTGCCTGTTGCCAATGCCTCCGTT 50340 Query 158071 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 | || ||||| || || || ||||| || ||| Sbjct 50341 CTCGACGAAGCTACCGCCGCCGCAGAGGCCATG 50373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048406756800