Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq13 86.0 1e-11 >seq13 Length=341173 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| || | | || |||| || | ||||| |||||||| || | | | Sbjct 272689 ATGTTATAATCGGACAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGC 272748 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || ||||| || || || ||||| || || || || || | || || || ||| || Sbjct 272749 TGCTGGTCTGGCGGAATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCTATCGTG 272808 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || ||||||||||| ||||| || ||||| || || | ||| || | ||| |||||| Sbjct 272809 TCGCTGGATTCTACTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGC 272868 Query 172068 AT 172069 || Sbjct 272869 AT 272870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905131700604000