Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq109 93.3 1e-13 >seq109 Length=59048 Score = 93.3 bits (102), Expect = 1e-13 Identities = 118/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 |||| || || || ||||||| ||||| || | || || |||||| ||| |||||| Sbjct 41538 AGCGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATTTTCTTCAGCGGCTCCTTC-GCCTCC 41596 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 ||||||||| |||| |||||||| || |||| ||| || ||||| |||||||| ||| Sbjct 41597 ATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCCGGACTCACCTTCTCCAACGAACTCATC 41656 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 || ||||| || | || || || ||||| ||||| Sbjct 41657 TCCCGTGACGAAGGCCTACACACTGATTTTGCCTGCCTTCT 41697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588328266789100