Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F001651445.1_202016-05-19] 19 sequences; 22,301,977 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq16 129 1e-24 >seq16 Length=1024933 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || ||||| || || || || | ||||| || || |||||||||||||| Sbjct 591255 TCCTTCTGGATGTTATAATCGGACAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAG 591314 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || || || || || ||||| || ||||| ||||||| || || || Sbjct 591315 ATGAGACGCTGCTGGTCTGGCGGAATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTTG 591374 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 |||| || ||||| | |||||| || || || ||||| || || || ||||| || || Sbjct 591375 TCTATCGTGTCGCTGGATTCTACTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACG 591434 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 591435 AAGATCTGCAT 591445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398119706452