Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20rubrum_20[genbank_20GCA_5F001651445.1_202016-05-19]
19 sequences; 22,301,977 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq18 138 2e-28
>seq18
Length=2912371
Score = 138 bits (152), Expect = 2e-28
Identities = 179/245 (73%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| || || ||||||| |||| || || || |||||||| || ||||||||||| || ||
Sbjct 1052147 GCCAAACGCCATCGCAAGATC-CTCCGCGACAACATCCACGGCATCACCAAGCCTGCCAT 1052205
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| || || |||||||| ||||||||| |||| | || |||| | ||||
Sbjct 1052206 CCGCCGTCTCGCCCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGGCGAGAC 1052265
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| ||||||| || ||| |||| || || || ||| || ||
Sbjct 1052266 CCGCAACGTGCTCAAGTCCTTCCTCGAGGGCGTCATCCGCGACGCCGTCACCTACACTGA 1052325
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || || ||||| |||||||| | || ||||||| || | || || || ||
Sbjct 1052326 ACACGCCAAGCGCAAGACAGTCACCTCTCTCGACGTCGTCTACGCTCTCAAGCGCCAGGG 1052385
Query 16672 CCGTA 16676
|||||
Sbjct 1052386 CCGTA 1052390
Score = 102 bits (112), Expect = 1e-17
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| || | |||| || || || |||||||| || ||||||||||| || |
Sbjct 2459289 CGCCAAGCGTCACCGTAAGATC-CTCCGCGACAACATCCACGGCATCACCAAGCCCGCCA 2459347
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
|||| ||||| |||||||||||||| ||||||||| ||||
Sbjct 2459348 TCCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 2459387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075182628167
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |