Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F001651445.1_202016-05-19] 19 sequences; 22,301,977 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq19 107 4e-18 >seq19 Length=1505300 Score = 107 bits (118), Expect = 4e-18 Identities = 175/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| |||||||| | ||| |||| ||| | ||| || | || || Sbjct 42008 ATCATCACTGAAGCAGTCACCATCGAGCAGGAGTTCTTGACCGATGCCCTCCCCTGTGCC 42067 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| | |||||||| || | |||||| | |||||||| || ||||| ||||| | || Sbjct 42068 CTTCTCGGCATGAATGCTAAGCTCATGTGCCAGTACATTGAGTTCGTCGCCGATAGGCTT 42127 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || | || |||||| | |||| | |||||| ||| |||||||| | ||| ||||| Sbjct 42128 CTCGTTGCTCTTGGTAACAAGAAGTTCTACAACACCACCAACCCCTTCGACTTCATGGAC 42187 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 || || || || || || ||||||||||| |||||||| | ||||| || Sbjct 42188 AATATCTCCCTCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGAGATTACCAGAAA 42247 Query 243742 CCTGGTGTGATG 243753 ||||||| ||| Sbjct 42248 GCTGGTGTCATG 42259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879731517650