Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F001651445.1_202016-05-19] 19 sequences; 22,301,977 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq19 136 5e-27 seq14 98.7 1e-15 >seq19 Length=1505300 Score = 136 bits (150), Expect = 5e-27 Identities = 309/458 (67%), Gaps = 15/458 (3%) Strand=Plus/Minus Query 127221 CCAGCTTGCCG-TAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTG 127279 ||||||| | | || || || || ||||||||||||||||| ||||| ||| ||||| | Sbjct 42252 CCAGCTTTCTGGTAATCTCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGGGAG 42193 Query 127280 ATATTCTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCT 127337 ||||| ||||| || || || ||||| | | ||| | | || ||| ||| | | Sbjct 42192 ATATTGTCCATGAAGTCGAAGGGGTTGGTGGTGTTGTAGAACTTCTTGTTACCAAGAGCA 42133 Query 127338 GTTTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATAC 127397 ||| || | ||| | |||| |||||||||||| |||| || || ||||| | Sbjct 42132 AC--GAGAAGCCTATCGGCGACGAACTCAATGTACTGGCACATGAGCTTAGCATTCATGC 42075 Query 127398 CGATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCC 127457 ||| ||| ||| ||||| || || | |||| ||| ||| ||| || ||||| Sbjct 42074 CGAGAAGGGCACAGGGGAGGGCATCGGTCAAGAACTCCTGCTCGATGGTGACTGCTTCAG 42015 Query 127458 GTACGATGGCGTGAATAGTGTCCACCC----CAGGTCTATTGCGTAAAGTCTT-GAAGAG 127512 | |||||| | || || ||| |||| | || | | | || ||| || Sbjct 42014 TGATGATGGCCTCAACAG----CACTGGGGTCAGGACGATAGT-TGAGGTGAGAGAACAG 41960 Query 127513 TTCCACAGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCA 127572 ||||| || ||| || || |||||||||||||||||||| || |||||| Sbjct 41959 AAGGCAGGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGT 41900 Query 127573 CAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAA 127632 || || ||||||||||| |||||||||| |||||| || | || ||||| ||| Sbjct 41899 GAGTCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAA 41840 Query 127633 GAAGATCCCCTCCACACACGCGAACGCAAATAGACGCT 127670 ||| || ||||| || || || |||| || |||| Sbjct 41839 GAAAATACCCTCGACGGCAGCAAAGGCAACAAGGCGCT 41802 >seq14 Length=2198313 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 116423 TAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTA 116482 |||||||||| || || |||| ||||| || | |||||| | ||||| || | Sbjct 1894627 TAGGAAGGGCAATAGAAGCCAAGTTACAAACTGCAACCTCATCTGGGGCGGTGTATTCAA 1894686 Query 116483 TAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 116542 ||||| || || | |||||||| || || || | |||||||||||| |||| Sbjct 1894687 CGATTTCAGTGCAAAGGTTTGAACTACGGATAGTACCAAGGTTCTTTTGATTGCTCTTTC 1894746 Query 116543 TGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 116602 ||| || | ||||||||| |||||| | || | || |||||||| |||| || ||||| Sbjct 1894747 GGTTGCAGGAATCCTTGTAAAGCATAAAGGGGTTTCCAGTCTCCGTCTGGGCCTCGAGAA 1894806 Query 116603 TAGCCTTCCATA 116614 | || | ||||| Sbjct 1894807 TGGCGTACCATA 1894818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507054292040