Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F001651445.1_202016-05-19] 19 sequences; 22,301,977 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq14 122 4e-23 >seq14 Length=2198313 Score = 122 bits (134), Expect = 4e-23 Identities = 310/469 (66%), Gaps = 2/469 (0%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||| || ||||||| |||||| |||| | |||||| || ||| || ||||| || Sbjct 1894983 ATTAGGGCAGAATAGGGTCCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGG 1895042 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 | |||||| || | |||| ||| | || | | |||||| ||||| || ||||| Sbjct 1895043 AGTCCACAAGGCCAAGAATAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCG 1895102 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 || || | ||| ||||| ||||| | ||||||||| || | ||||||||||| ||| Sbjct 1895103 GAGGTCAAGGAACTCAAAGATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACC 1895162 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | | || ||||| || || || ||||| ||||| | ||||| || | ||| Sbjct 1895163 TGGACGCTTGTTGCCACCCTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCAT 1895222 Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 || || | ||| | || | ||||| || | | ||| | |||||| || | | || Sbjct 1895223 GGGGACGATTCCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGAT 1895282 Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAAA 26246 | ||| | | || ||||||||| ||||| |||||||| ||||| ||| | Sbjct 1895283 ACGGTGGACGTTAAGACCGATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCT-TCA 1895341 Query 26247 CTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATA 26306 ||| ||| | || |||| || || || | ||||| | | | || || |||| | Sbjct 1895342 GTGTGTCGTAGATACCTTCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCA 1895401 Query 26307 ATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGT 26355 ||||| || | ||||| | ||| || | || || | ||||| || Sbjct 1895402 TTTGCGGCTGCGGGGTTCCGGCATTGAAGAGAGTGGGAGAGGCATGGGT 1895450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039941405425