Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F001651445.1_202016-05-19] 19 sequences; 22,301,977 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq16 141 6e-29 >seq16 Length=1024933 Score = 141 bits (156), Expect = 6e-29 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || ||| |||| ||| || | ||||||||| | |||||||| || || ||||| ||||| Sbjct 591215 GTTACCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAATC 591274 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 ||| || || || |||| || | |||||||| ||||| || | ||||||||| ||| | Sbjct 591275 GGACAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCTGG 591334 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697 ||| | |||||| ||||| || || ||| | || | ||| | |||||||| |||| Sbjct 591335 CGGAATACCTTCCTTGTCCTGGATCTT-TGTCTTGACGTTGTCTATCGTGTCGCTGGATT 591393 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | ||||| ||||| || || | || || || ||||||||||| Sbjct 591394 CTACTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCAT 591445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703923884480