Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq241 201 1e-46 seq144 102 1e-16 >seq241 Length=1026449 Score = 201 bits (222), Expect = 1e-46 Identities = 590/904 (65%), Gaps = 4/904 (0%) Strand=Plus/Plus Query 53942 TACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACAC 54001 |||||| || ||||| ||||| | |||| ||||||||||| |||| || || Sbjct 699651 TACAATGCCTCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCATTAGGGCAG 699710 Query 54002 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 54061 | | | ||| || || | | | ||||| ||||| || | ||||||| |||| | Sbjct 699711 AATAGGGTCCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAAG 699770 Query 54062 GCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 54121 || | |||||||| | || | ||| || ||||| ||||| || || ||| Sbjct 699771 GCCAAGAATAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAGG 699830 Query 54122 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTG 54181 ||| | | ||||||| ||||| || |||| ||| || | | | || || || ||| Sbjct 699831 AACTCAAAGATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTTG 699890 Query 54182 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 54241 || || ||||| || | ||||| || ||||| || | || | | ||| || | || Sbjct 699891 TTGCCACCCTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATT 699950 Query 54242 CCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATT 54301 || ||||| | || ||||| || | || ||| ||| ||||||| ||| | Sbjct 699951 CCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACG 700010 Query 54302 GATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 54361 ||||| || || || || | || || || || || || || | || || ||| Sbjct 700011 TTAAGACCGATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAG 700070 Query 54362 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 54421 || || || ||||| || ||| |||||| || || || ||| || |||||| | | Sbjct 700071 ATACCTTCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGC 700130 Query 54422 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 54481 ||||| ||||| || | || ||||| || || || || |||| | || | ||| Sbjct 700131 GGGGTTCCGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGA 700190 Query 54482 TTGTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCAT 54540 ||||| || || || || || | ||| || | || || || || || || ||||| Sbjct 700191 TTGTATGTTTCAATTACTTTCTCAACGTCCTCACCG-TGGATACCGACGGCAACTCGCAT 700249 Query 54541 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTC 54600 || ||| ||||| || | |||| | | |||| ||| || |||| ||| || |||| Sbjct 700250 TATCATATGCTGTGGCCGTTCAGCAACCTTGCCGTTGGTTCGTAGCAGGTATGACCTTTC 700309 Query 54601 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660 | || || || || ||||| | ||| |||||| || ||||| | |||| | ||||| Sbjct 700310 AAGCGTCTTGAAGCCGAAATACTGGTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTT 700369 Query 54661 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATG 54720 ||||| || || ||| | || | ||| || | || || || |||| | Sbjct 700370 GAGTTCTTCAGCATGTTTCATGACGATCTCCCGAGTCTTCTCGGATATCATGGGAGCTGG 700429 Query 54721 TTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTA-AATAGtt 54779 || || ||||| || || |||| | | | || | || || || | ||| | | Sbjct 700430 CCGGCCGTTCTTAGGGTTAACGTAGTGATAGAGGTCATCTATAAC-GGACGAGAATTGCT 700488 Query 54780 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCG 54839 | || |||| |||||| || || || || |||||||| || || ||||||||||| || | Sbjct 700489 TCTTGGTTTGTTTGTGGAGGTTCGACACTGCTATTCTTGCAGCAAGAATGGCATAGTCTG 700548 Query 54840 GATG 54843 |||| Sbjct 700549 GATG 700552 >seq144 Length=62475 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || || ||||| |||||| || ||||| | || | ||||||||| || |||||| Sbjct 14415 CAGGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGT 14474 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| || |||||||| || ||||| || ||||| || || || || |||||| Sbjct 14475 CCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAA 14534 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAG 24283 || || || || || |||||||||| ||| Sbjct 14535 ATACCCTCGACGGCAGCAAAGGCAACAAG 14563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593719662983280