Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq144 114 3e-20
seq241 89.7 1e-12
>seq144
Length=62475
Score = 114 bits (126), Expect = 3e-20
Identities = 289/433 (67%), Gaps = 25/433 (6%)
Strand=Plus/Minus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
|||||||||||||||| || || || || ||||| || || | ||||| ||||| ||||
Sbjct 14562 TTGTTGCCTTTGCTGCCGTCGAGGGTATTTTCTTCAGCGGCTCCTTCGCCTCCATCTTCT 14503
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| | ||||| | ||| | |||| || ||||||| |||||| || |||| || | |
Sbjct 14502 GGCTGAAGAAGCGTGGTCTCATGCCCGGACTCACCTTCTCCAACGAACTCATCTCCCGTG 14443
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGT----TGAAAAAGGGTTTTGTTGAT 102091
||||||| || || || ||||| ||| | |||| | | | | ||
Sbjct 14442 ACGAAGGCCTACACACTGATTTTGCCTGCCTTCTGTTCTCTCACCTCAACTATCGTCCTG 14383
Query 102092 ACCCCATCAAGAGAAAGGATTCTTGA---AATTGTCACTGAAGCCGTCCGAATTGAACAA 102148
||||| || | |||| || |||||||||| ||| || || ||
Sbjct 14382 ACCCC----------AGTGCTGTTGAGGCCATCATCACTGAAGCAGTCACCATCGAGCAG 14333
Query 102149 GAATTTCTCACAGTTTCCCT-GCCTGTTAAATTAGTGGGAATGAACTGC-AAGTTGATGA 102206
|| || | || | | |||| ||||| || | || ||||| ||| ||| | |||
Sbjct 14332 GAGTTCTTGACCGATGCCCTCCCCTGTGCCCTT-CTCGGCATGAA-TGCTAAGCTCATGT 14275
Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCA 102264
||||||||||||| || || || |||| || | |||| | || || || |||
Sbjct 14274 GCCAGTACATTGAGTTCGTCGCCGATAGGCTTCTCGTTGCTCTTGGTAACAAG--AAGTT 14217
Query 102265 CTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAA 102324
||| || |||||||||||| |||||||||||||| ||||||| ||||||||
Sbjct 14216 CTACAACACCACCAACCCCTTCGACTTCATGGACAATATCTCCCTCGCTGGCAAGACCAA 14157
Query 102325 CTTTTTTGAAAAG 102337
||| || || |||
Sbjct 14156 CTTCTTCGAGAAG 14144
>seq241
Length=1026449
Score = 89.7 bits (98), Expect = 1e-12
Identities = 175/256 (68%), Gaps = 2/256 (1%)
Strand=Plus/Plus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| ||||||||||||||| || || | || ||| || || || || |||||
Sbjct 700017 CCGATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAGATACCT 700076
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGT 94904
|| || || || || | | | | | |||||||| || | | ||| || || | ||
Sbjct 700077 TCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGCG-GGGT 700135
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || || ||||| || |||||||| || || | | |||||||||| ||
Sbjct 700136 TCCGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGATTGTA 700195
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||||||||| || | | ||| ||||| || ||||| || || ||||| |||||
Sbjct 700196 TGTTTCAATTACTTTCTCAACGTCCTCACCGTGGATACCGACGGCAACTCGCATTATCAT 700255
Query 95025 GTCCTGAGGGCGCTCA 95040
| ||| || || |||
Sbjct 700256 ATGCTGTGGCCGTTCA 700271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989580690769255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |