Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq241 201 1e-46
seq144 102 1e-16
>seq241
Length=1026449
Score = 201 bits (222), Expect = 1e-46
Identities = 590/904 (65%), Gaps = 4/904 (0%)
Strand=Plus/Plus
Query 63180 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACAC 63239
|||||| |||||||| ||||| | |||| |||||| |||| |||| || ||
Sbjct 699651 TACAATGCCTCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCATTAGGGCAG 699710
Query 63240 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 63299
| | | ||| || || | | | ||||| ||||| || | ||||||| |||| |
Sbjct 699711 AATAGGGTCCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAAG 699770
Query 63300 GCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63359
|| | |||||||| | | | ||| || ||||| ||||| || || |||
Sbjct 699771 GCCAAGAATAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAGG 699830
Query 63360 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63419
||| | | ||||||| ||||| || |||| ||| || || | | || || || |||
Sbjct 699831 AACTCAAAGATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTTG 699890
Query 63420 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63479
|| || ||||| || | ||||| || ||||| || | || | | ||| || | ||
Sbjct 699891 TTGCCACCCTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATT 699950
Query 63480 CCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATT 63539
||||| || || ||||| || | || ||| ||| ||||||| ||| |
Sbjct 699951 CCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACG 700010
Query 63540 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAG 63599
||||| ||||| || || | || || || || || || || | ||||| |||
Sbjct 700011 TTAAGACCGATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAG 700070
Query 63600 ATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63659
|| ||||| || || || || |||||| || || || ||| || |||||| | |
Sbjct 700071 ATACCTTCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGC 700130
Query 63660 GTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63719
| ||||| ||||| || | || ||||| || || || || |||| | || | |||
Sbjct 700131 GGGGTTCCGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGA 700190
Query 63720 TTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCAT 63778
||||| || ||||| || || | ||| || | || || || || || || |||||
Sbjct 700191 TTGTATGTTTCAATTACTTTCTCAACGTCCTCACCG-TGGATACCGACGGCAACTCGCAT 700249
Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838
|| ||| ||||| || | |||| ||| ||| ||| || | || ||| || ||||
Sbjct 700250 TATCATATGCTGTGGCCGTTCAGCAACCTTGCCGTTGGTTCGTAGCAGGTATGACCTTTC 700309
Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898
| || || || || ||||| | ||| |||||| || ||||| | |||| |||| ||
Sbjct 700310 AAGCGTCTTGAAGCCGAAATACTGGTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTT 700369
Query 63899 GAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATG 63958
||| | || || ||| | || || ||| || | || || || |||| |
Sbjct 700370 GAGTTCTTCAGCATGTTTCATGACGATCTCCCGAGTCTTCTCGGATATCATGGGAGCTGG 700429
Query 63959 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtt 64017
|| || ||||| ||||| |||| | | || || || || || | ||| | |
Sbjct 700430 CCGGCCGTTCTTAGGGTTAACGTAGTGATAGAGGTCATCTATAACGG-ACGAGAATTGCT 700488
Query 64018 tttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCG 64077
| || |||| ||||| || || || | |||||||| || || ||||||||||| || |
Sbjct 700489 TCTTGGTTTGTTTGTGGAGGTTCGACACTGCTATTCTTGCAGCAAGAATGGCATAGTCTG 700548
Query 64078 GATG 64081
||||
Sbjct 700549 GATG 700552
Score = 86.0 bits (94), Expect = 8e-12
Identities = 190/282 (67%), Gaps = 5/282 (2%)
Strand=Plus/Plus
Query 62034 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62093
|||| ||| | ||||||||| || ||||| || || | | ||||| |||||||||||
Sbjct 698435 TCCTGGTCTACTGTGAATTGGATTGGAGCAGACGCAGCCATGGTACGGAGATAGTACATG 698494
Query 62094 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTA-GTTTGGAATAACT 62152
|| || || |||||||| |||| || || |||||||| || | ||| || |
Sbjct 698495 CCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATACTGGTGATCTTTCCCAT-GGT 698553
Query 62153 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62212
|| ||| | ||||| || | |||||| || || |||||||| || | || ||
Sbjct 698554 AGGCTCTTTCAAGTGGATGTTGAGGGATTGAGACTGGTCAATGAAGGCGCCTCGATCAGC 698613
Query 62213 AGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 62272
||||| | | || || ||| | ||||||||| | || || || | ||| ||
Sbjct 698614 GGCCATCTGAACAATAGTACGTTGAGAAATTTCCCACACGGTCTTGTACAGAGCCTTGAT 698673
Query 62273 ATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATC 62311
||| |||| | ||| | | || || ||||| ||||| ||
Sbjct 698674 GTCTGCTGGGATGTTAGAGATGTTTTGGATGGAACCACCGTC 698715
>seq144
Length=62475
Score = 102 bits (112), Expect = 1e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| || ||||| ||| || || ||||| | || | |||||| || || ||||||
Sbjct 14415 CAGGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGT 14474
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|||||||| || |||||||| || ||||| || ||||| ||||| || ||| |||||
Sbjct 14475 CCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAA 14534
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAG 33730
|| || || || ||||||||||||| |||
Sbjct 14535 ATACCCTCGACGGCAGCAAAGGCAACAAG 14563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629815545220080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |