Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq241 201 1e-46 seq144 104 3e-17 >seq241 Length=1026449 Score = 201 bits (222), Expect = 1e-46 Identities = 590/904 (65%), Gaps = 4/904 (0%) Strand=Plus/Plus Query 65973 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACAC 66032 |||||| |||||||| ||||| | |||| ||||||||||| |||| || || Sbjct 699651 TACAATGCCTCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCATTAGGGCAG 699710 Query 66033 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 66092 | | | ||| || || | | | ||||| ||||| || | ||||||| |||| | Sbjct 699711 AATAGGGTCCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAAG 699770 Query 66093 GCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 66152 || | |||| ||| | || | ||| || ||||| ||||| || || ||| Sbjct 699771 GCCAAGAATAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAGG 699830 Query 66153 AACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 66212 ||| | | |||||| ||||| || |||| ||| || || | | || || || ||| Sbjct 699831 AACTCAAAGATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTTG 699890 Query 66213 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 66272 || || ||||| || | ||||| || ||||| || | || | | ||| || | || Sbjct 699891 TTGCCACCCTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATT 699950 Query 66273 CCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATT 66332 || ||||| | || ||||| || | || ||| ||| | ||||| ||| | Sbjct 699951 CCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACG 700010 Query 66333 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 66392 ||||| ||||| || || | || || || || || || || | || || ||| Sbjct 700011 TTAAGACCGATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAG 700070 Query 66393 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 66452 || || || ||||| || ||| |||||| || || || ||| || |||||| | | Sbjct 700071 ATACCTTCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGC 700130 Query 66453 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 66512 ||||| ||||| || | || ||||| || || || || |||| | || | ||| Sbjct 700131 GGGGTTCCGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGA 700190 Query 66513 TTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCAT 66571 ||||| || ||||| || || | ||| || | || || || || || || ||||| Sbjct 700191 TTGTATGTTTCAATTACTTTCTCAACGTCCTCACCG-TGGATACCGACGGCAACTCGCAT 700249 Query 66572 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 66631 || ||| ||||| || | |||| | | |||| ||| || | || ||| || |||| Sbjct 700250 TATCATATGCTGTGGCCGTTCAGCAACCTTGCCGTTGGTTCGTAGCAGGTATGACCTTTC 700309 Query 66632 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691 | || || || || ||||| | ||| |||||| || ||||| | |||| ||||||| Sbjct 700310 AAGCGTCTTGAAGCCGAAATACTGGTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTT 700369 Query 66692 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATG 66751 ||||| || || ||| | || | ||| || | || || || |||| | Sbjct 700370 GAGTTCTTCAGCATGTTTCATGACGATCTCCCGAGTCTTCTCGGATATCATGGGAGCTGG 700429 Query 66752 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtt 66810 || || ||||| || || |||| | | || || || || || | ||| | | Sbjct 700430 CCGGCCGTTCTTAGGGTTAACGTAGTGATAGAGGTCATCTATAAC-GGACGAGAATTGCT 700488 Query 66811 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCG 66870 | || |||| |||||| || || || || |||||||| || || | ||||||||| || | Sbjct 700489 TCTTGGTTTGTTTGTGGAGGTTCGACACTGCTATTCTTGCAGCAAGAATGGCATAGTCTG 700548 Query 66871 GATG 66874 |||| Sbjct 700549 GATG 700552 Score = 87.8 bits (96), Expect = 2e-12 Identities = 196/291 (67%), Gaps = 5/291 (2%) Strand=Plus/Plus Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886 |||| ||| | ||||||||| || ||||| || || | | ||||| ||||||||||| Sbjct 698435 TCCTGGTCTACTGTGAATTGGATTGGAGCAGACGCAGCCATGGTACGGAGATAGTACATG 698494 Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTA-GTTTGGAATAACT 64945 || || || |||||||| |||| || || |||||||| || | ||| || | Sbjct 698495 CCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATACTGGTGATCTTTCCCAT-GGT 698553 Query 64946 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 65005 || ||| | ||||| || | |||||| || || |||||||| || | || || Sbjct 698554 AGGCTCTTTCAAGTGGATGTTGAGGGATTGAGACTGGTCAATGAAGGCGCCTCGATCAGC 698613 Query 65006 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 65065 ||||| | | || || ||| | ||||||||| | || || || | ||| || Sbjct 698614 GGCCATCTGAACAATAGTACGTTGAGAAATTTCCCACACGGTCTTGTACAGAGCCTTGAT 698673 Query 65066 ATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAAT 65113 ||| |||| | ||| | | || || ||||| ||||| || || || || Sbjct 698674 GTCTGCTGGGATGTTAGAGATGTTTTGGATGGAACCACCGTCGGCGATGAT 698724 >seq144 Length=62475 Score = 104 bits (114), Expect = 3e-17 Identities = 151/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || ||||| |||||| || ||||| | || | ||||||||| || |||||| Sbjct 14415 CAGGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGT 14474 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| || |||||||| || ||||| || ||||| || || || || |||||| Sbjct 14475 CCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAA 14534 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA---CTGTCATGT 36334 || || || || || |||||||||| ||| | || | | | || | | || || Sbjct 14535 ATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGTGCGAATGTGGAATTCTTATCTTGG 14594 Query 36335 ATCCA-CTTTTGAGCCCAATCGGCCTTCTT 36363 ||||| | || ||||||||||||||||| Sbjct 14595 ATCCATCGAATG-GCCCAATCGGCCTTCTT 14623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658170652711240