Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq210 98.7 1e-15 >seq210 Length=1335347 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 |||||||| || |||| || || || | ||| ||| || || |||||||||||| | Sbjct 1131600 CCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAATCGGAC 1131541 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||| || |||||||| |||||| |||| ||||| ||||| || || || Sbjct 1131540 AGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGCGGA 1131481 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| ||||| ||| ||| || | | || | |||||| ||| || || Sbjct 1131480 ATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCTATCGTGTCGCTGGATTCTACT 1131421 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || ||||| |||| || || ||||| || ||||| Sbjct 1131420 TCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCAT 1131374 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||| ||||||||||| || ||| |||| ||||||||||| || ||||| ||||| || || Sbjct 1131301 GTCCTCGAGCTGTTTTCCTGCAAAGATGAGACGTTGCTGGTCTGGAGGGATGCCCTCCTT 1131242 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | |||||| ||| || ||||||| || | Sbjct 1131241 GTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGATTCGACCTCAAGAGTGAT 1131182 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATA 139757 ||||||||||||| ||||| |||| || Sbjct 1131181 GGTCTTGCCGGTCAGAGTTTTCACGACTA 1131153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062381591200