Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq144 84.2 2e-11
seq210 82.4 7e-11
>seq144
Length=62475
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 120341 GTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCTTAAGAAAAAATCGTTC 120400
||| |||||| | || | ||| ||||| || || | ||||| | || ||||||||
Sbjct 14867 GTTAACGATGCCATCTGAGGCGGCGAAGAAGGCCAAGACGTGGGAGATGAAGAATCGTTC 14926
Query 120401 TTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACATGTCGATCTCTTCGAC 120460
| || || || | |||||||| |||| || ||||| || | ||| ||||||||| |
Sbjct 14927 ATCGTCATTGAGCCTGTTGTTCCAGTCGTGAATATCCTTAGAGAGGTCAATCTCTTCGGC 14986
Query 120461 TTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501
||||| | || | | |||||||||||| ||||||||
Sbjct 14987 AGTCCAGAAAGAAGCTTCAGCTTTCTTGTACATTTGCCAGA 15027
>seq210
Length=1335347
Score = 82.4 bits (90), Expect = 7e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 26781 GTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAG 26840
|| ||||| | || || || | ||||| | || | ||||| | ||||||||||||
Sbjct 1131158 GTGAAAACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAATCCAGCGACACCATCGAC 1131217
Query 26841 CAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATT 26900
| ||||| ||||| ||||| || || || ||||| || || ||| | |||||
Sbjct 1131218 AACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAGCAACGTCTCATC 1131277
Query 26901 TACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAA 26960
| | || ||||| ||||| || | | | | || ||||| ||||| ||||| |||
Sbjct 1131278 TTTGCAGGAAAACAGCTCGAGGACGGCCGGACCCTCTCGGACTACAACATCCAAAAGGAA 1131337
Query 26961 TCTACTATCCATCTGGTCCT 26980
|| ||| |||| || |||||
Sbjct 1131338 TCAACTCTCCACCTTGTCCT 1131357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478660838363920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |