Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq241 242 1e-58 >seq241 Length=1026449 Score = 242 bits (268), Expect = 1e-58 Identities = 418/598 (70%), Gaps = 8/598 (1%) Strand=Plus/Minus Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449 |||||| | |||||| | || | || ||||| || | ||| || | ||| ||| Sbjct 700328 TTTCGGCTTCAAGACGCTTGAAAGGTCATACCTGCTACGAACCAACGGCAAGGTTGCTGA 700269 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 ||| || ||||||||| ||||||| ||||| | |||||||| | ||| ||||| Sbjct 700268 ACGGCCACAGCATATGATAATGCGAGTTGCCGTCGGTATCCACGGTGAGGACGTTGAGAA 700209 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAACA 363567 | ||||||||||| || || | || | | || ||||| || ||| | || || Sbjct 700208 AGTAATTGAAACATACAATCTCAT--GTCCCAGAAATACTTCACCCATGCCTCTCCCACT 700151 Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627 | | |||||| ||||| | | || || ||| |||| ||||| || | | |||||| Sbjct 700150 CTCTTCAATGCCGGAACCCCGCAGCCGCAAATGGCTTCCTGCTTCCTCATTGACATGAAG 700091 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 || || ||||| ||||||| |||||||| |||| |||||| | ||||| |||| | Sbjct 700090 GAGGACAGTATCGAAGGTATCTACGACACACTGAAGACCTGTGCTTTGATTTCAAAGACT 700031 Query 363688 GCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCG 363745 || || ||||| ||| | | || ||||| | | ||||| || | | | ||||| | Sbjct 700030 GCTGGAGGAATCGGTCTTAACG-TCCACCGTATCCGTGCCACCGGATCCT-ACATTGCTG 699973 Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805 | || || | ||| || || | || ||||||||||||||||| |||| ||||| | Sbjct 699972 GAACCAACGGCTCCTCCAACGGAATCGTCCCCATGCTTCGTGTGTTCAACAACACTGCCA 699913 Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865 | || |||||||||||||| ||||| ||| || |||||||| || || ||||| Sbjct 699912 GATATGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCCTTTGCTATCTACCTGGAGCCAT 699853 Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || || ||||| |||||||| ||||| ||||| || ||| ||||| || ||| | | Sbjct 699852 GGCACGCTGATATCTTTGAGTTCCTTGACCTCCGCAAGAACCATGGAAAGGAAGAAGTCC 699793 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 |||| |||||||| |||| || | ||| | |||| || |||||||| || || Sbjct 699792 GTGCCCGTGATCTATTCTTGGCCTTGTGGACTCCTGATTTGTTCATGAAGCGAGTTGA 699735 Score = 170 bits (188), Expect = 5e-37 Identities = 624/961 (65%), Gaps = 22/961 (2%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||||||||||||| ||||| | || | |||| ||||| |||| |||| |||| Sbjct 699546 GCCCAGAAGCTATGGTACGCCATTCTCGAGGCCCAGACGGAGACTGGAAACCCCTTTATG 699487 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| ||||| |||||||| ||| ||| || || |||||||||| | || | || Sbjct 699486 CTTTACAAGGATTCCTGCAACCGAAAGAGCAATCAAAAGAACCTTGGTACTA-TCCGTAG 699428 Query 364231 AGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289 | ||||| || || || || ||||||||||||| || || ||| ||| || ||||| Sbjct 699427 TTCAAACCTTTGCACTGAAATCGTTGAATACACCGCCCCAGATGAGGTTGCAGTTTGTAA 699368 Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCA-----G 364344 | | || || || || ||||| | ||||| | | || | ||| || | | Sbjct 699367 CTTGGCTTCTATTGCCCTTCCTACCTTTGTGGATGCTGTTCGCGGTGAATACGATTTTGG 699308 Query 364345 C-ATCTTTATGACGTAACCTATCATGCTACTTG---CAATCTCG-ACAAGGTTATCGACA 364399 | | || |||| || || ||| | | ||| || || | ||| | || ||| Sbjct 699307 CAAACTCCATGAAGTCAC---TCA-GGTCGTTGTCAGAAACTTGAACAGAATCATTGACG 699252 Query 364400 AGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCGATTGGT 364458 ||| | || || || || || ||| || ||| | ||||||||||| |||| | Sbjct 699251 GGAACCACTACCCGGTTGAAGAGGCACGA-CGAAGCAATTTCCGTCATCGCCCCATTGCT 699193 Query 364459 CTTGGTGTACAGGGCCTCGCTGACGTTTTTAT-GATGCTCAAGATGGCATTTGATTCGCC 364517 | || || |||||||| || || | ||| | | | || | || | || || || || Sbjct 699192 GTGGGGGTCCAGGGCCTTGCCGATGCTTTCCTCGCTCTTCGA-CTGCCCTTCGACTCTCC 699134 Query 364518 TGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGC 364577 || || || | || | | ||||| || || | || ||| || |||| || Sbjct 699133 CGAAGCCAAGCTTTTGAACACCCAAATCTTCGAGACCCTTTACCATGCTGCGTTGACCGC 699074 Query 364578 TTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTC 364637 |||||||| | || || | | || ||||| | |||||||| || ||| |||| Sbjct 699073 ATCGTGTGAACTTGCCAAGGTCGATGGTCCATACTCCTCCTATGAGGGTTCTCCTGTTTC 699014 Query 364638 GCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGA 364697 ||||| | | || | ||| | ||||| || ||||| | | || ||| ||||||| Sbjct 699013 TCAGGGTATTCTTCAATACGATATGTGGAACGTAACGCCGACCGACCTCTGGGACTGGGA 698954 Query 364698 TACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCAT 364757 | || | | | ||||| ||| || ||| | | | |||||||| Sbjct 698953 TGGTCTTAAAGCTGAGATCTCCAAGCACGGTGTCCGTAACAGCTTACTACTTGCGCCCAT 698894 Query 364758 GCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAG 364817 ||| || || || ||||| || || |||||||||||| ||||| | || Sbjct 698893 GCCAACTGCCAGCACCAGTCAGATTCTTGGCTTCAACGAGTGCTTTGAACCTTACACCTC 698834 Query 364818 CAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGT 364877 ||| | || |||||||| || ||| | || || || | || || || | || | Sbjct 698833 CAACATCTACTCACGCCGTGTACTTGCTGGCGAGTTCCAAGTTGTCAACCCATGGCTTCT 698774 Query 364878 CAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGC 364937 ||| || || ||||| ||| |||||| |||| ||||| ||| ||||||||||| Sbjct 698773 CAAAGACCTGGTCGACCTCGGCCTGTGGTCCGACAATATGAAAAACCGTATCATCGCCGA 698714 Query 364938 TAATGGTTCTGTGCAGAACAT-TCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAA 364996 |||||| | || ||||| || | | | |||| ||| | ||| || | ||||| | Sbjct 698713 CGGTGGTTCCATCCAAAACATCTCTAACA-TCCCAGCAGACATCAAGGCTCTGTACAAGA 698655 Query 364997 CCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTA 365056 |||| ||||||||||| || ||| | || | ||||| || ||||| || || || | Sbjct 698654 CCGTGTGGGAAATTTCTCAACGTACTATTGTTCAGATGGCCGCTGATCGAGGCGCCTTCA 698595 Query 365057 T 365057 | Sbjct 698594 T 698594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349241504102