Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq241 242 1e-58
>seq241
Length=1026449
Score = 242 bits (268), Expect = 1e-58
Identities = 418/598 (70%), Gaps = 8/598 (1%)
Strand=Plus/Minus
Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449
|||||| | |||||| | || | || ||||| || | ||| || | ||| |||
Sbjct 700328 TTTCGGCTTCAAGACGCTTGAAAGGTCATACCTGCTACGAACCAACGGCAAGGTTGCTGA 700269
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
||| || ||||||||| ||||||| ||||| | |||||||| | ||| |||||
Sbjct 700268 ACGGCCACAGCATATGATAATGCGAGTTGCCGTCGGTATCCACGGTGAGGACGTTGAGAA 700209
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAACA 363567
| ||||||||||| || || | || | | || ||||| || ||| | || ||
Sbjct 700208 AGTAATTGAAACATACAATCTCAT--GTCCCAGAAATACTTCACCCATGCCTCTCCCACT 700151
Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627
| | |||||| ||||| | | || || ||| |||| ||||| || | | ||||||
Sbjct 700150 CTCTTCAATGCCGGAACCCCGCAGCCGCAAATGGCTTCCTGCTTCCTCATTGACATGAAG 700091
Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687
|| || ||||| ||||||| |||||||| |||| |||||| | ||||| |||| |
Sbjct 700090 GAGGACAGTATCGAAGGTATCTACGACACACTGAAGACCTGTGCTTTGATTTCAAAGACT 700031
Query 363688 GCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCG 363745
|| || ||||| ||| | | || ||||| | | ||||| || | | | ||||| |
Sbjct 700030 GCTGGAGGAATCGGTCTTAACG-TCCACCGTATCCGTGCCACCGGATCCT-ACATTGCTG 699973
Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805
| || || | ||| || || | || ||||||||||||||||| |||| ||||| |
Sbjct 699972 GAACCAACGGCTCCTCCAACGGAATCGTCCCCATGCTTCGTGTGTTCAACAACACTGCCA 699913
Query 363806 GGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTC 363865
| || |||||||||||||| ||||| ||| || |||||||| || || |||||
Sbjct 699912 GATATGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCCTTTGCTATCTACCTGGAGCCAT 699853
Query 363866 ATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925
|| || ||||| |||||||| ||||| ||||| || ||| ||||| || ||| | |
Sbjct 699852 GGCACGCTGATATCTTTGAGTTCCTTGACCTCCGCAAGAACCATGGAAAGGAAGAAGTCC 699793
Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
|||| |||||||| |||| || | ||| | |||| || |||||||| || ||
Sbjct 699792 GTGCCCGTGATCTATTCTTGGCCTTGTGGACTCCTGATTTGTTCATGAAGCGAGTTGA 699735
Score = 170 bits (188), Expect = 5e-37
Identities = 624/961 (65%), Gaps = 22/961 (2%)
Strand=Plus/Minus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||||||||||||| ||||| | || | |||| ||||| |||| |||| ||||
Sbjct 699546 GCCCAGAAGCTATGGTACGCCATTCTCGAGGCCCAGACGGAGACTGGAAACCCCTTTATG 699487
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||| ||||| |||||||| ||| ||| || || |||||||||| | || | ||
Sbjct 699486 CTTTACAAGGATTCCTGCAACCGAAAGAGCAATCAAAAGAACCTTGGTACTA-TCCGTAG 699428
Query 364231 AGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289
| ||||| || || || || ||||||||||||| || || ||| ||| || |||||
Sbjct 699427 TTCAAACCTTTGCACTGAAATCGTTGAATACACCGCCCCAGATGAGGTTGCAGTTTGTAA 699368
Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCA-----G 364344
| | || || || || ||||| | ||||| | | || | ||| || | |
Sbjct 699367 CTTGGCTTCTATTGCCCTTCCTACCTTTGTGGATGCTGTTCGCGGTGAATACGATTTTGG 699308
Query 364345 C-ATCTTTATGACGTAACCTATCATGCTACTTG---CAATCTCG-ACAAGGTTATCGACA 364399
| | || |||| || || ||| | | ||| || || | ||| | || |||
Sbjct 699307 CAAACTCCATGAAGTCAC---TCA-GGTCGTTGTCAGAAACTTGAACAGAATCATTGACG 699252
Query 364400 AGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCGATTGGT 364458
||| | || || || || || ||| || ||| | ||||||||||| |||| |
Sbjct 699251 GGAACCACTACCCGGTTGAAGAGGCACGA-CGAAGCAATTTCCGTCATCGCCCCATTGCT 699193
Query 364459 CTTGGTGTACAGGGCCTCGCTGACGTTTTTAT-GATGCTCAAGATGGCATTTGATTCGCC 364517
| || || |||||||| || || | ||| | | | || | || | || || || ||
Sbjct 699192 GTGGGGGTCCAGGGCCTTGCCGATGCTTTCCTCGCTCTTCGA-CTGCCCTTCGACTCTCC 699134
Query 364518 TGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGC 364577
|| || || | || | | ||||| || || | || ||| || |||| ||
Sbjct 699133 CGAAGCCAAGCTTTTGAACACCCAAATCTTCGAGACCCTTTACCATGCTGCGTTGACCGC 699074
Query 364578 TTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTC 364637
|||||||| | || || | | || ||||| | |||||||| || ||| ||||
Sbjct 699073 ATCGTGTGAACTTGCCAAGGTCGATGGTCCATACTCCTCCTATGAGGGTTCTCCTGTTTC 699014
Query 364638 GCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGA 364697
||||| | | || | ||| | ||||| || ||||| | | || ||| |||||||
Sbjct 699013 TCAGGGTATTCTTCAATACGATATGTGGAACGTAACGCCGACCGACCTCTGGGACTGGGA 698954
Query 364698 TACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCAT 364757
| || | | | ||||| ||| || ||| | | | ||||||||
Sbjct 698953 TGGTCTTAAAGCTGAGATCTCCAAGCACGGTGTCCGTAACAGCTTACTACTTGCGCCCAT 698894
Query 364758 GCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAG 364817
||| || || || ||||| || || |||||||||||| ||||| | ||
Sbjct 698893 GCCAACTGCCAGCACCAGTCAGATTCTTGGCTTCAACGAGTGCTTTGAACCTTACACCTC 698834
Query 364818 CAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGT 364877
||| | || |||||||| || ||| | || || || | || || || | || |
Sbjct 698833 CAACATCTACTCACGCCGTGTACTTGCTGGCGAGTTCCAAGTTGTCAACCCATGGCTTCT 698774
Query 364878 CAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGC 364937
||| || || ||||| ||| |||||| |||| ||||| ||| |||||||||||
Sbjct 698773 CAAAGACCTGGTCGACCTCGGCCTGTGGTCCGACAATATGAAAAACCGTATCATCGCCGA 698714
Query 364938 TAATGGTTCTGTGCAGAACAT-TCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAA 364996
|||||| | || ||||| || | | | |||| ||| | ||| || | ||||| |
Sbjct 698713 CGGTGGTTCCATCCAAAACATCTCTAACA-TCCCAGCAGACATCAAGGCTCTGTACAAGA 698655
Query 364997 CCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTA 365056
|||| ||||||||||| || ||| | || | ||||| || ||||| || || || |
Sbjct 698654 CCGTGTGGGAAATTTCTCAACGTACTATTGTTCAGATGGCCGCTGATCGAGGCGCCTTCA 698595
Query 365057 T 365057
|
Sbjct 698594 T 698594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303349241504102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |