Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq210 114 9e-21
seq17 114 9e-21
>seq210
Length=1335347
Score = 114 bits (126), Expect = 9e-21
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147
||||| |||| ||| |||| ||||||||| | ||||||||||| || || || |||||
Sbjct 1131603 TTACCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAATCG 1131544
Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207
|||| || |||| || | |||||||| ||||| || || || || || || |
Sbjct 1131543 GACAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGC 1131484
Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267
|| | ||||| |||||| || ||| ||| || || | | || || | |||
Sbjct 1131483 GGAATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCTATCGTGTCGCTGGATTCT 1131424
Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
||||| | || |||||||| ||||||| || || ||||| |||||||||
Sbjct 1131423 ACTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCATG 1131373
>seq17
Length=439
Score = 114 bits (126), Expect = 9e-21
Identities = 77/86 (90%), Gaps = 5/86 (6%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||||||| |||| ||||| || ||||||||
Sbjct 86 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATCGTAGGTAGGGACAGCGGGAATCTCGT 27
Query 25957 TAATCCTTTCATGCGCGTCACTAATT 25982
|||||| |||||||||||||||||||
Sbjct 26 TAATCCATTCATGCGCGTCACTAATT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946134553891
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |