Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq210 176 8e-39
seq144 150 3e-31
seq123 125 1e-23
seq199 102 2e-16
>seq210
Length=1335347
Score = 176 bits (194), Expect = 8e-39
Identities = 181/234 (77%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288
|| || || || || | |||| ||||| || | |||| ||| || ||||||||||||
Sbjct 1131606 TAGTTACCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAA 1131547
Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348
||||| || |||| || || || | ||| || || || || ||||| | || |||||
Sbjct 1131546 TCGGACAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCT 1131487
Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-A 68407
|| ||||| ||||||||||| || ||||||| ||||||| || || ||||| |||| |
Sbjct 1131486 GGCGGAATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCTATCGTGTC-GCTGGA 1131428
Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||||||||| ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 1131427 TTCTACTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCAT 1131374
Score = 134 bits (148), Expect = 3e-26
Identities = 164/221 (74%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || || | || | ||| || || || || ||||||||||| || || |||
Sbjct 1131372 CCTCCACGCAGACGAAGGACAAGGTGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGAG 1131313
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| || || || | ||| || || || || ||||| | ||| ||||| || ||
Sbjct 1131312 AGGGTCCGGCCGTCCTCGAGCTGTTTTCCTGCAAAGATGAGACGTTGCTGGTCTGGAGGG 1131253
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
||||| |||||||| || ||||| | ||||||| ||||||||||| ||| ||||| ||
Sbjct 1131252 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTC-GCTGGATTCGAC 1131194
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454
|| | |||||||| || || || || || || |||| ||
Sbjct 1131193 CTCAAGAGTGATGGTCTTGCCGGTCAGAGTTTTCACGACTA 1131153
>seq144
Length=62475
Score = 150 bits (166), Expect = 3e-31
Identities = 321/474 (68%), Gaps = 18/474 (4%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || || |||||||| || || || |||||||||||||| |||||| |
Sbjct 14111 CATGACACCAGCTTTCTGGTAATCTCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 14170
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGG---CGCCAAACTGCTTGGGGTA 10051
|||||| || ||||||||||| |||||||| || | |||| ||| ||
Sbjct 14171 GAGGGAGATATTGTCCATGAAGTCGAAGGGGTTGGTGGTGTTGTAGAACTTCTT---GTT 14227
Query 10052 ACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGA 10111
||| || || || || | || || |||||||| |||||||||| ||| || | |
Sbjct 14228 ACCAAGAGCAACGAGAAGCCTATCGGCGACGAACTCAATGTACTGGCACATGAGCTTAGC 14287
Query 10112 GTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171
|||||||| | | | ||||||| ||| ||| | ||| |||| ||| ||| |||
Sbjct 14288 ATTCATGCCGAGAAGGGCACAGGGGAGGGCATCGGTCAAGAACTCCTGCTCGATGGTGAC 14347
Query 10172 CGCTTCCTCGACGATG--CTCTTTACCAC----GTCAAGGGACAGCTTGTTCTCGAGCTT 10225
||||| || |||| ||| | ||| |||| |||| | | ||| ||| |
Sbjct 14348 TGCTTCAGTGATGATGGCCTCAACAGCACTGGGGTCA--GGAC-GATAGTT---GAGGTG 14401
Query 10226 CGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285
|| |||| || |||| | ||| ||||| ||||| ||| ||||| |||||
Sbjct 14402 AGAGAACAGAAGGCAGGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTT 14461
Query 10286 GGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGA 10345
||| || || ||||||||||| || || || ||||||||| |||| | ||| ||
Sbjct 14462 GGAGAAGGTGAGTCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGA 14521
Query 10346 CCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAA 10399
||| ||| | || |||||| ||| | |||| || ||||||| ||||||
Sbjct 14522 GCCGCTGAAGAAAATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGTGCGAA 14575
>seq123
Length=229
Score = 125 bits (138), Expect = 1e-23
Identities = 112/138 (81%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
|| || || || || || ||||| || ||||||||||||||||| || ||||| ||||||
Sbjct 229 GCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTG 170
Query 68385 ACGGCCTCGATGGTGTCTGCTGAT-TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGT 68443
||| ||| |||||||| |||| || || |||| ||||||||| || || ||||||||
Sbjct 169 ACGTTCTCAATGGTGTC-GCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGT 111
Query 68444 CTTGACGAATATCTGCAT 68461
|||||| || ||||||||
Sbjct 110 CTTGACAAAGATCTGCAT 93
>seq199
Length=1802728
Score = 102 bits (112), Expect = 2e-16
Identities = 153/215 (71%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 224961 GGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGT 225020
|||||| || | ||| | |||||||||||||||| | ||||||| |||| |||||||
Sbjct 1638614 GGTCCTCACCGGTGGCGAAACGCCACTGGATGTACTCGGAGGGGGTCTTGTCGAGGTGGT 1638673
Query 225021 TCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCC 225080
| || || ||| ||| || ||||| | ||| || || || ||||| ||||
Sbjct 1638674 TATCGATGTGGGCGAAGGCGTGCTGCTTGATGTAGGCAATACGGATGTTCTCGTGCTGGT 1638733
Query 225081 ACACAGAGCCCCGAGT-CGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTG 225139
| || ||| || || || | ||| ||||| ||||| |||| ||| || | ||||
Sbjct 1638734 AGACCTCGCCGGTGGTGGGGATGAG-CTCACCGGTCAGGACGTTGACGAGAGTGGACTTG 1638792
Query 225140 CCCGCACCATTGGGGCCAATCACGCCAATCCGGGA 225174
|| ||||| |||||||| || ||| | || |||||
Sbjct 1638793 CCGGCACCGTTGGGGCCGATGACGGCGATACGGGA 1638827
Score = 87.8 bits (96), Expect = 3e-12
Identities = 319/494 (65%), Gaps = 19/494 (4%)
Strand=Plus/Plus
Query 225514 GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573
|||||| || ||||| ||||||| | ||||| || || ||||| || || ||||||||
Sbjct 1639164 GAGCCAGGCGACGTTCTTGACGTCGAGATGGTTGGTGGGCTCGTCGAGCAGGAGGATGTC 1639223
Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633
| | || || ||| || | ||| | |||||||| |||||||| ||||| || ||
Sbjct 1639224 TGGCTTCTCGAAGACGGCACGGGCGAGGGCGAGCTTCATCTTCCAGCCACCGGAGAGCGA 1639283
Query 225634 GCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGAGCGTCT---GGAT 225690
| |||| | | ||| | | | |||||| |||| | |||| || ||||
Sbjct 1639284 GGCGATGGGGCTCTCGAGCTGCTCACGGACGAAGCCGAACTCGACGAGCTGCTCCTGGAT 1639343
Query 225691 AATGC---GCTCGGGAGAGCTGC-GA----GCGGCAACGTTGGGGTCGGACGAGAGGTAA 225742
| |||||| | | ||| || |||| | || |||| | || |
Sbjct 1639344 GGCGGAGAGCTCGGTGGTGATGCCGACATCGCGG--AGCTTCTTCTCGGTCCAGCCG--- 1639398
Query 225743 TCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGG 225802
|| |||||| || | | | ||||| | |||||| || ||| | || ||| |
Sbjct 1639399 --ATG-ACGGTCTGCTCGGTATCGGCGGCGTCGAGGTCGTGCTCGACGAAGACGGTCTTG 1639455
Query 225803 AGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTA 225862
| || | |||||||||||| | ||| | || || ||||| | |||||
Sbjct 1639456 ACCTCGTCCTTCTTGGGGAAGCCCTCGACCTGCTCGTTGTTGATGGCACGCATGAGGGTG 1639515
Query 225863 CTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGG 225922
|||||| | ||||||||| || | ||| ||||| | | |||||||| | ||||
Sbjct 1639516 GACTTGCCGGAGCCGTTGGGGCCCAGGAGACCGTAGCGCTGGCCGCGCTTAAGACGGAGG 1639575
Query 225923 CGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGG 225982
| || ||| || ||||||||| |||| ||||| ||| ||| ||| | ||| ||
Sbjct 1639576 TGGGTCTGGTTGAGCAGGATCTTGGCACCGTAGGCGAGGTTGAAGGTGCAGTTGCAGAGA 1639635
Query 225983 TCCTCACCCTCCTC 225996
|||||||| || ||
Sbjct 1639636 TCCTCACCTTCTTC 1639649
Score = 84.2 bits (92), Expect = 4e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 224437 GAATTCAGTGCTGTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGA 224496
|||||| || ||| | |||| | ||||| || |||| |||| ||||| ||
Sbjct 1638045 GAATTCCTTGGAGTGGGTGATAATGATGACACCACCCTCGAAGGACTTGAGGGCCTTGGA 1638104
Query 224497 AAGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTG 224556
|| ||||| || || || ||||| || |||| || ||||| || |||| ||| | |||
Sbjct 1638105 GAGGGCGCCGAGAGAGTCACGGTCGAGATAGTTGGTTGGCTCGTCGAGGACGATCAGGTG 1638164
Query 224557 GGGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCC 224616
|||| ||||| | || | | || | ||| || ||||||||||||||| ||
Sbjct 1638165 AGGGCGTTGCCAGGAGCAGGCGGCGAGGACGACCTTGACACGCTGACCGCCAGAGAGACC 1638224
Query 224617 GCGGATCCGCGAGTGAGTCGTGAATTCGGGGTCAAGACC 224655
||| || |||||||| | || ||||| ||| || ||
Sbjct 1638225 GCGCATGCGCGAGTGGGAGACGAGTTCGGCGTCGAGGCC 1638263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921619393206920
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