Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq144 228 2e-54
seq241 113 9e-20
>seq144
Length=62475
Score = 228 bits (252), Expect = 2e-54
Identities = 327/449 (73%), Gaps = 19/449 (4%)
Strand=Plus/Minus
Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764
|| || |||||| | ||||||||||| || |||||| ||| |||||||||||||||||
Sbjct 14563 CTTGTTGCCTTTGCTGCCGTCGAGGGTATTTTCTTCAGCGGCTCCTTCGCCTCCATCTTC 14504
Query 42765 TGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823
||||| ||| || ||| || |||||||||||||||||||| |||||||||||| | |
Sbjct 14503 TGGCTGAAGAAGCGTGGTCTC-ATGCCCGGACTCACCTTCTCCAACGAACTCATCTCCCG 14445
Query 42824 GGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA 42883
||||| || || || | || ||||||||||| |||||||| ||||||| || |
Sbjct 14444 TGACGAAGGCCTACACACTGATTTTGCCTGCCTTCTGTTCTC---TCACCTCA---ACTA 14391
Query 42884 --GCCCTCGAAGGAGCG-GGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGA 42940
| ||| || | || |||||||||||| || || || |||||| ||||
Sbjct 14390 TCGTCCTGACCCCAGTGCTGTTGAGGCCATCATCACTGAAGCAGTCACCATCGAGCAGGA 14331
Query 42941 GTTCCTCACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCA 42999
|||| | || | | || ||| ||| |||| |||||||||| | |||||||||
Sbjct 14330 GTTCTTGACCGATGCCCTCCCCTGTG-CCCTTCTCGGCATGAATGCTAAGCTCATGTGCC 14272
Query 43000 AGTACATCCAGTACGTCGCCGA---CCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCT 43056
||||||| ||| ||||||||| | |||| | ||| | ||| || |||
Sbjct 14271 AGTACATTGAGTTCGTCGCCGATAGGCTTCTCGT-TGC--TCTTGGTAACAAGAAGTTCT 14215
Query 43057 ACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACT 43116
||||||| | |||||||||||| ||||| || ||||| | | |||||||||||||
Sbjct 14214 ACAACACCACCAACCCCTTCGACTTCATGGACAATATCTCCCTCGCTGGCAAGACCAACT 14155
Query 43117 TTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
| ||||||||||| || | || ||||||
Sbjct 14154 TCTTCGAGAAGCGTGTTGGAGATTACCAG 14126
>seq241
Length=1026449
Score = 113 bits (124), Expect = 9e-20
Identities = 251/369 (68%), Gaps = 12/369 (3%)
Strand=Plus/Plus
Query 245077 GTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGC 245136
|||||| | || || | || ||||||| || ||||||| ||||||| ||||| |||
Sbjct 699812 GTTCTTGCGGAGGTCAAGGAACTCAAAGATATCAGCGTGCCATGGCTCCAGGTAGATAGC 699871
Query 245137 GAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAG 245194
| ||| || || ||||||||||| |||||||| | ||| ||| | || | ||||||
Sbjct 699872 AAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGA-CAT-ATCTGGCAGTGTTGTTGAAC 699929
Query 245195 ATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCC 245254
| || || | || || || ||||| ||| ||||||||| || ||||||| ||
Sbjct 699930 ACACGAAGCATGGGGACGATTCCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGATCCG 699989
Query 245255 TTGCCCCTGAGGTTGCTGATGGAC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAG 245310
|| | | || | | | ||||| | || | ||| || || ||| || || |
Sbjct 699990 GTGGCAC---GGATAC-GGTGGACGTTAAGACCGATTCCTCCAGCAGTCTTTGAAATCAA 700045
Query 245311 GGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAG 245370
|| ||| |||| | ||||| || || || || |||||| |||||||| | ||
Sbjct 700046 AGCACAGGTCTTCAGTGTGTCGTAGATACCTTCGATACTGTCCTCCTTCATGTCAATGAG 700105
Query 245371 AAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTG 245430
|||||||| | || || |||| ||| | | | ||||| |||||||| ||| ||
Sbjct 700106 GAAGCAGGAAGCCATTTGCGGCTGCGGGGTTCCGGCATTGAAGAGAGTGGGAGAGGCATG 700165
Query 245431 GGTAAAGTA 245439
||| |||||
Sbjct 700166 GGTGAAGTA 700174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944336119093360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |