Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq144 123 3e-23
seq241 118 1e-21
>seq144
Length=62475
Score = 123 bits (136), Expect = 3e-23
Identities = 307/462 (66%), Gaps = 23/462 (5%)
Strand=Plus/Plus
Query 125748 CCAGCTTGCCG-TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTG 125806
||||||| | | || || ||||| ||||||||||||||||| ||||| || | | | |
Sbjct 14118 CCAGCTTTCTGGTAATCTCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGGGAG 14177
Query 125807 ATATTCTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCT 125864
||||| ||||| || || || ||||| | | ||| | | || ||| ||| | |
Sbjct 14178 ATATTGTCCATGAAGTCGAAGGGGTTGGTGGTGTTGTAGAACTTCTTGTTACCAAGAGCA 14237
Query 125865 GTTTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATAC 125924
||| || | ||| | |||| |||||||||||| |||| || || ||||| |
Sbjct 14238 AC--GAGAAGCCTATCGGCGACGAACTCAATGTACTGGCACATGAGCTTAGCATTCATGC 14295
Query 125925 CGATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCC 125984
||| ||| ||| ||||| || || | |||| ||| ||| || || |||||
Sbjct 14296 CGAGAAGGGCACAGGGGAGGGCATCGGTCAAGAACTCCTGCTCGATGGTGACTGCTTCAG 14355
Query 125985 GCACGATGGCGTGAA------TGGTGTCCACCCCAGGTCTAT---TGCGCAAAGTCTTGA 126035
| |||||| | || ||| ||| ||| | || || | || ||
Sbjct 14356 TGATGATGGCCTCAACAGCACTGGGGTC------AGGACGATAGTTGAGGTGAGA---GA 14406
Query 126036 AGAGTTCCACGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGA 126095
| || |||||| || ||| || || |||||||||||||||||||| || ||||
Sbjct 14407 ACAGAAGGCAGGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGA 14466
Query 126096 AGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCG 126155
|| ||||| ||||||||||| |||||||||| |||||| || | || || ||
Sbjct 14467 AGGTGAGTCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGC 14526
Query 126156 AGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCT 126197
|||||| || ||||| || || || |||| || ||||
Sbjct 14527 TGAAGAAAATACCCTCGACGGCAGCAAAGGCAACAAGGCGCT 14568
>seq241
Length=1026449
Score = 118 bits (130), Expect = 1e-21
Identities = 677/1069 (63%), Gaps = 28/1069 (3%)
Strand=Plus/Plus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
||||| |||||||| || |||||||| || |||||||| || | ||||| ||
Sbjct 698480 CGGAGATAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATACTGGTG 698539
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716
| ||| | || || || || | || ||| | ||| || || || ||||||
Sbjct 698540 ATCTTTCCCATGGTAGGCTCTTTCAAGTGGATGTTGAGGGATTGAGACTGGTCAATGAAG 698599
Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTC 113774
|| ||||| || ||||| | || || || | | | || |||||||||| ||
Sbjct 698600 GCGCCTCGATCAGCGGCCATCTGAA-CA-ATAGTACGTTGAGAAATTTCCCACACGGTCT 698657
Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCT 113834
|||| || ||| || || ||||||| | ||| ||||||||||| ||||| |
Sbjct 698658 TGTACAGAGCCTTGATGTCTGCTGGGATGTTAGAGATGTTTTGGATGGAACCACCGTCGG 698717
Query 113835 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 113894
|| || | | ||||||| | ||||| || || | | || || | | |
Sbjct 698718 CGATGATACGGTTTTTCATATTGTCGGACCACAGGCCGAGGTCGACCAGGTCTTTGAGAA 698777
Query 113895 G--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGG 113951
| ||| | ||||||| ||||| || || || || | | || ||||| ||||
Sbjct 698778 GCCATGGGT--TGACAACTTGGAACTCGCCAGCAAGTACACGGCGTGAG-TAGATGTTGG 698834
Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC-GGTGGAGGCTGTGGGC 114010
||||| || ||||||||||| ||| | |||||| | | | |||| ||| || |||
Sbjct 698835 AGGTGTAAGGTTCAAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTGCTGGCAGTTGGC 698893
Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCG 114070
||||| || | || | ||||||||||| ||| | | || | || || |
Sbjct 698894 ATGGGCGCAAGTAGTAAGCTGTTACGGACACCGTGCTTGGAGATCTCAGCTTTAAGACCA 698953
Query 114071 TCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTGCCACATATCAAACTGGAGGATACCT 114127
|||||||| || || | ||| | | | ||||||||| | || || |||||
Sbjct 698954 TCCCAGTCCCAG---AGGTCGGTCGGCGTTACGTTCCACATATCGTATTGAAGAATACCC 699010
Query 114128 TGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAG 114187
|| || | || || |||||| | | |||||| || || |||| || | ||| |
Sbjct 699011 TGAGAAACAGGAGAACCCTCATAGGAGGAGTATGGACCATCGACCTTGGCAAGTTCACAC 699070
Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247
|| | || || || || | ||||| || || | | |||| ||||||
Sbjct 699071 GATGCGGTCAACGCAGCATGGTAAAGGGTCTCGAAGATTTGGGTGTTCAAAAGCTTGGCT 699130
Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 114307
||| || || || | ||||| | || |||| || || || ||||| ||
Sbjct 699131 TCGGGAGAGTCGAAGGGCAGTCGAAGAGCGAGGAAAGCATCGGCAAGGCCCTGGACCCCC 699190
Query 114308 AGGCCAATTGGGCGATGTCTCATATTAGACTT--TCGAGCGGTCTCCACGGGATAAAAAT 114365
| |||| |||||||| | | ||| ||| ||| || || || || || |
Sbjct 699191 ACAGCAATGGGGCGATGACGGAAATTG--CTTCGTCGTGCCTCTTCAACCGGGTAGTGGT 699248
Query 114366 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 114425
||| || || | || || | ||| || || |||| |||| |||||| || ||
Sbjct 699249 TCCCGTCAATGATTCTGTTCAAGTTTCTGACAACGACCTGAGTGACTTCATGGAGTTTGC 699308
Query 114426 CGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 114482
| |||| | || |||| | ||| ||| | |||||||||| || || ||||
Sbjct 699309 CAAAATCGTATTCACCGCGAA---CAGCATCCACAAAGGTAGGAAGGGCAATAGAAGCCA 699365
Query 114483 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 114542
||||| || | |||||| | ||||| || | ||||| || || | ||||
Sbjct 699366 AGTTACAAACTGCAACCTCATCTGGGGCGGTGTATTCAACGATTTCAGTGCAAAGGTTTG 699425
Query 114543 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 114602
|||| || || || | |||||||||||| |||| ||| || | |||||||||||
Sbjct 699426 AACTACGGATAGTACCAAGGTTCTTTTGATTGCTCTTTCGGTTGCAGGAATCCTTGTAAA 699485
Query 114603 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651
|||| | || | || |||||||| |||| || |||||| || | |||
Sbjct 699486 GCATAAAGGGGTTTCCAGTCTCCGTCTGGGCCTCGAGAATGGCGTACCA 699534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597351651133880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |