Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq144 123 3e-23 seq241 118 1e-21 >seq144 Length=62475 Score = 123 bits (136), Expect = 3e-23 Identities = 307/462 (66%), Gaps = 23/462 (5%) Strand=Plus/Plus Query 125748 CCAGCTTGCCG-TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTG 125806 ||||||| | | || || ||||| ||||||||||||||||| ||||| || | | | | Sbjct 14118 CCAGCTTTCTGGTAATCTCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGGGAG 14177 Query 125807 ATATTCTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCT 125864 ||||| ||||| || || || ||||| | | ||| | | || ||| ||| | | Sbjct 14178 ATATTGTCCATGAAGTCGAAGGGGTTGGTGGTGTTGTAGAACTTCTTGTTACCAAGAGCA 14237 Query 125865 GTTTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATAC 125924 ||| || | ||| | |||| |||||||||||| |||| || || ||||| | Sbjct 14238 AC--GAGAAGCCTATCGGCGACGAACTCAATGTACTGGCACATGAGCTTAGCATTCATGC 14295 Query 125925 CGATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCC 125984 ||| ||| ||| ||||| || || | |||| ||| ||| || || ||||| Sbjct 14296 CGAGAAGGGCACAGGGGAGGGCATCGGTCAAGAACTCCTGCTCGATGGTGACTGCTTCAG 14355 Query 125985 GCACGATGGCGTGAA------TGGTGTCCACCCCAGGTCTAT---TGCGCAAAGTCTTGA 126035 | |||||| | || ||| ||| ||| | || || | || || Sbjct 14356 TGATGATGGCCTCAACAGCACTGGGGTC------AGGACGATAGTTGAGGTGAGA---GA 14406 Query 126036 AGAGTTCCACGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGA 126095 | || |||||| || ||| || || |||||||||||||||||||| || |||| Sbjct 14407 ACAGAAGGCAGGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGA 14466 Query 126096 AGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCG 126155 || ||||| ||||||||||| |||||||||| |||||| || | || || || Sbjct 14467 AGGTGAGTCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGC 14526 Query 126156 AGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCT 126197 |||||| || ||||| || || || |||| || |||| Sbjct 14527 TGAAGAAAATACCCTCGACGGCAGCAAAGGCAACAAGGCGCT 14568 >seq241 Length=1026449 Score = 118 bits (130), Expect = 1e-21 Identities = 677/1069 (63%), Gaps = 28/1069 (3%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 ||||| |||||||| || |||||||| || |||||||| || | ||||| || Sbjct 698480 CGGAGATAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATACTGGTG 698539 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | ||| | || || || || | || ||| | ||| || || || |||||| Sbjct 698540 ATCTTTCCCATGGTAGGCTCTTTCAAGTGGATGTTGAGGGATTGAGACTGGTCAATGAAG 698599 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTC 113774 || ||||| || ||||| | || || || | | | || |||||||||| || Sbjct 698600 GCGCCTCGATCAGCGGCCATCTGAA-CA-ATAGTACGTTGAGAAATTTCCCACACGGTCT 698657 Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCT 113834 |||| || ||| || || ||||||| | ||| ||||||||||| ||||| | Sbjct 698658 TGTACAGAGCCTTGATGTCTGCTGGGATGTTAGAGATGTTTTGGATGGAACCACCGTCGG 698717 Query 113835 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 113894 || || | | ||||||| | ||||| || || | | || || | | | Sbjct 698718 CGATGATACGGTTTTTCATATTGTCGGACCACAGGCCGAGGTCGACCAGGTCTTTGAGAA 698777 Query 113895 G--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGG 113951 | ||| | ||||||| ||||| || || || || | | || ||||| |||| Sbjct 698778 GCCATGGGT--TGACAACTTGGAACTCGCCAGCAAGTACACGGCGTGAG-TAGATGTTGG 698834 Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC-GGTGGAGGCTGTGGGC 114010 ||||| || ||||||||||| ||| | |||||| | | | |||| ||| || ||| Sbjct 698835 AGGTGTAAGGTTCAAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTGCTGGCAGTTGGC 698893 Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCG 114070 ||||| || | || | ||||||||||| ||| | | || | || || | Sbjct 698894 ATGGGCGCAAGTAGTAAGCTGTTACGGACACCGTGCTTGGAGATCTCAGCTTTAAGACCA 698953 Query 114071 TCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTGCCACATATCAAACTGGAGGATACCT 114127 |||||||| || || | ||| | | | ||||||||| | || || ||||| Sbjct 698954 TCCCAGTCCCAG---AGGTCGGTCGGCGTTACGTTCCACATATCGTATTGAAGAATACCC 699010 Query 114128 TGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAG 114187 || || | || || |||||| | | |||||| || || |||| || | ||| | Sbjct 699011 TGAGAAACAGGAGAACCCTCATAGGAGGAGTATGGACCATCGACCTTGGCAAGTTCACAC 699070 Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247 || | || || || || | ||||| || || | | |||| |||||| Sbjct 699071 GATGCGGTCAACGCAGCATGGTAAAGGGTCTCGAAGATTTGGGTGTTCAAAAGCTTGGCT 699130 Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 114307 ||| || || || | ||||| | || |||| || || || ||||| || Sbjct 699131 TCGGGAGAGTCGAAGGGCAGTCGAAGAGCGAGGAAAGCATCGGCAAGGCCCTGGACCCCC 699190 Query 114308 AGGCCAATTGGGCGATGTCTCATATTAGACTT--TCGAGCGGTCTCCACGGGATAAAAAT 114365 | |||| |||||||| | | ||| ||| ||| || || || || || | Sbjct 699191 ACAGCAATGGGGCGATGACGGAAATTG--CTTCGTCGTGCCTCTTCAACCGGGTAGTGGT 699248 Query 114366 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 114425 ||| || || | || || | ||| || || |||| |||| |||||| || || Sbjct 699249 TCCCGTCAATGATTCTGTTCAAGTTTCTGACAACGACCTGAGTGACTTCATGGAGTTTGC 699308 Query 114426 CGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 114482 | |||| | || |||| | ||| ||| | |||||||||| || || |||| Sbjct 699309 CAAAATCGTATTCACCGCGAA---CAGCATCCACAAAGGTAGGAAGGGCAATAGAAGCCA 699365 Query 114483 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 114542 ||||| || | |||||| | ||||| || | ||||| || || | |||| Sbjct 699366 AGTTACAAACTGCAACCTCATCTGGGGCGGTGTATTCAACGATTTCAGTGCAAAGGTTTG 699425 Query 114543 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 114602 |||| || || || | |||||||||||| |||| ||| || | ||||||||||| Sbjct 699426 AACTACGGATAGTACCAAGGTTCTTTTGATTGCTCTTTCGGTTGCAGGAATCCTTGTAAA 699485 Query 114603 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651 |||| | || | || |||||||| |||| || |||||| || | ||| Sbjct 699486 GCATAAAGGGGTTTCCAGTCTCCGTCTGGGCCTCGAGAATGGCGTACCA 699534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351651133880