Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq210 167 3e-36 >seq210 Length=1335347 Score = 167 bits (184), Expect = 3e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||| || |||| |||||||||||| ||||||||||| || || || ||||| | Sbjct 1131601 ACCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAATCGGA 1131542 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| ||||| |||| || ||||| || ||||| || ||||| ||||||||||| | || Sbjct 1131541 CAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGCGG 1131482 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCA 42159 | | ||||||||| ||| ||| |||| ||| | | | ||||||||| ||||| | Sbjct 1131481 AATACCTTCCTTGTCCTGGATCTTTGTCTTGA-CGTTGTCTATCGTGTCGCTGGATTCTA 1131423 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | ||||| ||||||||||| || ||||| || ||||| ||||| Sbjct 1131422 CTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCAT 1131374 Score = 100 bits (110), Expect = 3e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||||||||| || || ||||| || | || || || |||| || ||||| || || Sbjct 1131044 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGTTTTCCT 1130985 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131 ||||| || || ||||||||||| | || | || |||||||||| ||| || ||| Sbjct 1130984 GCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTG 1130925 Query 42132 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | ||| | | | |||||||| || ||||| |||| ||||| || ||||| || Sbjct 1130924 A-CGTTGTCAATAGTGTCGCTGGACTCCACCTCGAGGGTGATAGTCTTGCCAGT 1130872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211027768240