Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq241 138 1e-27
>seq241
Length=1026449
Score = 138 bits (152), Expect = 1e-27
Identities = 330/493 (67%), Gaps = 7/493 (1%)
Strand=Plus/Minus
Query 93887 CCATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTT 93946
||||| || | || || || ||||| || || |||||| ||| || ||| |||| || |
Sbjct 700166 CCATG-CCTCTCCCACTCTCTTCAATGCCGGAACCCCGCAGCCGCAAATGGCTTCCTGCT 700108
Query 93947 TCCTGAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGT 94005
|||| || ||| | |||| ||| ||| || || | ||||| || ||| ||||
Sbjct 700107 TCCTCATTGAC-ATGAAGGAGGACAGTATCGAAGGTATCTACGACACACTGAAGACCTGT 700049
Query 94006 GCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCA 94063
|| || ||||| || || |||||||| | | |||||| |||| |||||||
Sbjct 700048 GCTTTGATTTCAAAGACTGCTGGAGGAATCGGTCTTAACGTCCAC--CGTATCCGTGCCA 699991
Query 94064 GGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGG 94123
|| |||||||| || ||||| ||| |||||||||| ||||||| ||||| || |
Sbjct 699990 CCGGATCCTACATTGCTGGAACCAACGGCTCCTCCAACGGAATCGTCCCCATGCTTCGTG 699931
Query 94124 TCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCG 94183
| ||||||||| | || | || || ||||||||||| | | | ||| | || |
Sbjct 699930 TGTTCAACAACACTGCCAGATATGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCCTTTG 699871
Query 94184 CGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACC 94243
| |||| || ||||| |||||||| || | | ||| | ||||| || |||||||
Sbjct 699870 CTATCTACCTGGAGCCATGGCACGCTGATATCTTTGAGTTCCTTGACCTCCGCAAGAACC 699811
Query 94244 ACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTT 94303
| || || || | | ||| | || || |||| || | ||| || || | |
Sbjct 699810 ATGGAAAGGAAGAAGTCCGTGCCCGTGATCTATTCTTGGCCTTGTGGACTCCTGATTTGT 699751
Query 94304 TTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCG 94363
| ||||| || || || || || || |||| || || || || ||||| ||| |
Sbjct 699750 TCATGAAGCGAGTTGAAAAGAATGGCGATTGGACCCTATTCTGCCCTAATGAGGCTCCTG 699691
Query 94364 GACTGTCCGACGT 94376
|| || | || ||
Sbjct 699690 GATTGGCTGATGT 699678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494721585965560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |