Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq210 109 5e-19
seq144 100 3e-16
>seq210
Length=1335347
Score = 109 bits (120), Expect = 5e-19
Identities = 166/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||||||||| |||| || ||||| | | |||||| || ||||| || ||| |
Sbjct 1131600 CCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAATCGGAC 1131541
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||| || ||||| || | | |||| |||||||| ||||| || ||
Sbjct 1131540 AGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGCGGA 1131481
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| || | ||||| || | ||| || | |||||| | || || |
Sbjct 1131480 ATACCTTCCTTGTC-CTGGATCTTTGTCTTGACGTTG-TCTATCGTGTCGCTGGATTCTA 1131423
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618
| || | || | ||||| || ||||| || || || || ||||||||| ||
Sbjct 1131422 CTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCATGCCT 1131370
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/186 (72%), Gaps = 4/186 (2%)
Strand=Plus/Minus
Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478
|||| |||||||| ||||||||||| | || || ||||||||| ||||| || |
Sbjct 1131341 TTGATTCCTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCGAGCTGTTTTCCTG 1131282
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538
| |||| ||||| || ||||| ||||| || || || ||||| ||| || || ||
Sbjct 1131281 CAAAGATGAGACGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTG-GTCTTG 1131223
Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596
| |||| | | ||||||| | || || ||||| | || | || || || ||||||||
Sbjct 1131222 ACGTTGT-CGATGGTGTCGCTGGATTCGACCTCAAGAGTGATGGTCTTGCCGGTCAGAGT 1131164
Query 138597 TTTTAC 138602
||| ||
Sbjct 1131163 TTTCAC 1131158
>seq144
Length=62475
Score = 100 bits (110), Expect = 3e-16
Identities = 300/453 (66%), Gaps = 25/453 (6%)
Strand=Plus/Minus
Query 52396 AGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttC--CGGCAGCTTTGCCGC 52453
||||| | || ||||| || |||||||| | |||| ||| |||| ||| ||| |
Sbjct 14568 AGCGCCTTGTTGCCTTTGCTGCCGTCGAGGG--TATTTTCTTCAGCGGCTCCTTCGCCTC 14511
Query 52454 CATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGAT 52513
|||||| | | || | | || | |||||||| || || ||| |||||| | ||
Sbjct 14510 CATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCCGGACTCACCTTCTCCAACGAACTCAT 14451
Query 52514 ATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT-CTACTACAAGACGCGCGTGA 52572
|| || |||||||| || ||||| || ||||| ||||| || | | | | |
Sbjct 14450 CTCCCGTGACGAAGGCCTACACACTGATTTTGCCTGCCTTCTGTT--------CTC-TCA 14400
Query 52573 CCGAAAAATTGGATTCGGACACGA----TCCTGAG--CATGTTCAAGGAGGCGGTGGCTA 52626
|| || | | | | ||| | | | |||| ||| ||| || || || | |
Sbjct 14399 CCTCAACTATCG-TCCTGACCCCAGTGCTGTTGAGGCCATCATCACTGAAGCAGTCACCA 14341
Query 52627 TCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGT 52686
|||| ||||||| || || | || || || | || || |||||||| || ||
Sbjct 14340 TCGAGCAGGAGTTCTTGACCGATGCCCTCCCCTGTGCCCTTCTCGGCATGAATGCTAAGC 14281
Query 52687 CCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG-GGCAGCCA 52745
||||||| ||||||| ||||| || || ||| | || | || |||| || | | |
Sbjct 14280 TCATGTGCCAGTACATTGAGTTCGTCGCCGATAGGCTTCTCGTT--GCTCTTGGTAACAA 14223
Query 52746 -AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAA 52804
|||| || |||| | ||| || || || || ||| |||| || || || | |||||
Sbjct 14222 GAAGTTCTACAACACCACCAACCCCTTCGACTTCATGGACAATATCTCCCTCGCTGGCAA 14163
Query 52805 GACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||||||| ||||||||||| || || || ||
Sbjct 14162 GACCAACTTCTTCGAGAAGCGTGTTGGAGATTA 14130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260780943920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |