Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq144 136 5e-27
seq241 102 1e-16
>seq144
Length=62475
Score = 136 bits (150), Expect = 5e-27
Identities = 309/458 (67%), Gaps = 15/458 (3%)
Strand=Plus/Plus
Query 127221 CCAGCTTGCCG-TAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTG 127279
||||||| | | || || || || ||||||||||||||||| ||||| ||| ||||| |
Sbjct 14118 CCAGCTTTCTGGTAATCTCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGGGAG 14177
Query 127280 ATATTCTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCT 127337
||||| ||||| || || || ||||| | | ||| | | || ||| ||| | |
Sbjct 14178 ATATTGTCCATGAAGTCGAAGGGGTTGGTGGTGTTGTAGAACTTCTTGTTACCAAGAGCA 14237
Query 127338 GTTTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATAC 127397
||| || | ||| | |||| |||||||||||| |||| || || ||||| |
Sbjct 14238 AC--GAGAAGCCTATCGGCGACGAACTCAATGTACTGGCACATGAGCTTAGCATTCATGC 14295
Query 127398 CGATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCC 127457
||| ||| ||| ||||| || || | |||| ||| ||| ||| || |||||
Sbjct 14296 CGAGAAGGGCACAGGGGAGGGCATCGGTCAAGAACTCCTGCTCGATGGTGACTGCTTCAG 14355
Query 127458 GTACGATGGCGTGAATAGTGTCCACCC----CAGGTCTATTGCGTAAAGTCTT-GAAGAG 127512
| |||||| | || || ||| |||| | || | | | || ||| ||
Sbjct 14356 TGATGATGGCCTCAACAG----CACTGGGGTCAGGACGATAGT-TGAGGTGAGAGAACAG 14410
Query 127513 TTCCACAGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCA 127572
||||| || ||| || || |||||||||||||||||||| || ||||||
Sbjct 14411 AAGGCAGGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGT 14470
Query 127573 CAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAA 127632
|| || ||||||||||| |||||||||| |||||| || | || ||||| |||
Sbjct 14471 GAGTCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAA 14530
Query 127633 GAAGATCCCCTCCACACACGCGAACGCAAATAGACGCT 127670
||| || ||||| || || || |||| || ||||
Sbjct 14531 GAAAATACCCTCGACGGCAGCAAAGGCAACAAGGCGCT 14568
>seq241
Length=1026449
Score = 102 bits (112), Expect = 1e-16
Identities = 672/1069 (63%), Gaps = 24/1069 (2%)
Strand=Plus/Plus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
||||| |||||||| || |||||||| || |||||||| || | ||||| ||
Sbjct 698480 CGGAGATAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATACTGGTG 698539
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677
| ||| | || || || || | || ||| | ||| || || || ||||||
Sbjct 698540 ATCTTTCCCATGGTAGGCTCTTTCAAGTGGATGTTGAGGGATTGAGACTGGTCAATGAAG 698599
Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTC 115735
|| ||||| || ||||| | || || || | | | || |||||||||| ||
Sbjct 698600 GCGCCTCGATCAGCGGCCATCTGAA-CA-ATAGTACGTTGAGAAATTTCCCACACGGTCT 698657
Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCT 115795
|||| || ||| || || ||||||| | ||| |||||||| || ||||| |
Sbjct 698658 TGTACAGAGCCTTGATGTCTGCTGGGATGTTAGAGATGTTTTGGATGGAACCACCGTCGG 698717
Query 115796 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGA 115855
|| || | | ||||||| | ||||| || || | | || || | | |
Sbjct 698718 CGATGATACGGTTTTTCATATTGTCGGACCACAGGCCGAGGTCGACCAGGTCTTTGAGAA 698777
Query 115856 GGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATGTTGGTC 115914
| |||||||| ||||| || || || || | | || ||||||||||
Sbjct 698778 GCCATGGGTTGACAACTTGGAACTCGCCAGCAAGTACACGGCGTGAG-TAGATGTTGGAG 698836
Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGCTGTGGGCAT 115973
||||| || ||||||||||| ||| | |||||| | | ||| || ||| || |||||
Sbjct 698837 GTGTAAGGTTCAAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTGCTGGCAGTTGGCAT 698895
Query 115974 GGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTC 116033
||| || | || | |||||| |||| ||| | || | || || | ||
Sbjct 698896 GGGCGCAAGTAGTAAGCTGTTACGGACACCGTGCTTGGAGATCTCAGCTTTAAGACCATC 698955
Query 116034 CCAGTCGTAGTTGAGCTTTGTCTCCC---CCTCCCACATATCAAACTGGAGGATACCTTG 116090
|||||| || || | ||| | | | ||||||||| | || || ||||| ||
Sbjct 698956 CCAGTCCCAG---AGGTCGGTCGGCGTTACGTTCCACATATCGTATTGAAGAATACCCTG 699012
Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 116150
|| | || || |||||| | | ||||| || || |||| || | ||| |
Sbjct 699013 AGAAACAGGAGAACCCTCATAGGAGGAGTATGGACCATCGACCTTGGCAAGTTCACACGA 699072
Query 116151 CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 116210
|| | || || || || | ||||| || || | | |||| |||||| ||
Sbjct 699073 TGCGGTCAACGCAGCATGGTAAAGGGTCTCGAAGATTTGGGTGTTCAAAAGCTTGGCTTC 699132
Query 116211 GTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 116270
| || || || | || || | || |||| || || || ||||| || |
Sbjct 699133 GGGAGAGTCGAAGGGCAGTCGAAGAGCGAGGAAAGCATCGGCAAGGCCCTGGACCCCCAC 699192
Query 116271 GCCAATTGGGCGATGTCTCATATTAGACTT--TCGAGCGGTCTCCACGGGATAAAAATTC 116328
|||| |||||||| | | ||| ||| ||| || || || || || |||
Sbjct 699193 AGCAATGGGGCGATGACGGAAATTG--CTTCGTCGTGCCTCTTCAACCGGGTAGTGGTTC 699250
Query 116329 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 116388
| || || | || || | ||| || || |||| |||| |||||| || || |
Sbjct 699251 CCGTCAATGATTCTGTTCAAGTTTCTGACAACGACCTGAGTGACTTCATGGAGTTTGCCA 699310
Query 116389 TAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 116445
|||| | || |||| | ||| ||| | |||||||||| || || ||||
Sbjct 699311 AAATCGTATTCACCGCGAA---CAGCATCCACAAAGGTAGGAAGGGCAATAGAAGCCAAG 699367
Query 116446 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 116505
||||| || | |||||| | ||||| || | ||||| || || | ||||||
Sbjct 699368 TTACAAACTGCAACCTCATCTGGGGCGGTGTATTCAACGATTTCAGTGCAAAGGTTTGAA 699427
Query 116506 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGC 116565
|| || || || | |||||||||||| |||| ||| || | ||||||||| |||
Sbjct 699428 CTACGGATAGTACCAAGGTTCTTTTGATTGCTCTTTCGGTTGCAGGAATCCTTGTAAAGC 699487
Query 116566 ATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA 116614
||| | || | || |||||||| |||| || |||||| || | |||||
Sbjct 699488 ATAAAGGGGTTTCCAGTCTCCGTCTGGGCCTCGAGAATGGCGTACCATA 699536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505198432760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |