Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq210 163 3e-35
>seq210
Length=1335347
Score = 163 bits (180), Expect = 3e-35
Identities = 178/234 (76%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420
|| || || |||| || |||| ||||| |||||| || |||||||| ||||| || ||
Sbjct 1131606 TAGTTACCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAA 1131547
Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480
||||| || || || |||| || ||||| || || || || || | |||||||||||
Sbjct 1131546 TCGGACAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCT 1131487
Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGA 46539
| ||| | | ||||||||| |||||| |||||| ||| | | | ||||||||| ||
Sbjct 1131486 GGCGGAATACCTTCCTTGTCCTGGATCTTTGTCTTGA-CGTTGTCTATCGTGTCGCTGGA 1131428
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || |||| ||||| |||||||||||||| || || || ||||| |||||
Sbjct 1131427 TTCTACTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCAT 1131374
Score = 136 bits (150), Expect = 4e-27
Identities = 136/174 (78%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456
|| |||||||| ||||| ||||||||||| || ||||| |||| |||||||| || ||
Sbjct 1131044 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGTTTTCCT 1130985
Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516
||||| |||| |||||||||||| | || | || |||||||||| |||||| |||||
Sbjct 1130984 GCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTG 1130925
Query 46517 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| ||| | | | |||||||| || ||||| || | ||||| || ||||| ||
Sbjct 1130924 A-CGTTGTCAATAGTGTCGCTGGACTCCACCTCGAGGGTGATAGTCTTGCCAGT 1130872
Score = 123 bits (136), Expect = 3e-23
Identities = 137/180 (76%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||||||||| |||||||| || || || || |||| |||||||| || || || ||
Sbjct 1131336 TCCTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCGAGCTGTTTTCCTGCAAAG 1131277
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | || |||||||| | || | || |||||||||| |||||| |||||| |||
Sbjct 1131276 ATGAGACGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTT 1131218
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | |||||||| ||||| || || | |||||||| ||||| ||||| ||||| ||
Sbjct 1131217 GTCGATGGTGTCGCTGGATTCGACCTCAAGAGTGATGGTCTTGCCGGTCAGAGTTTTCAC 1131158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565236555909720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |