Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq210 163 3e-35 >seq210 Length=1335347 Score = 163 bits (180), Expect = 3e-35 Identities = 178/234 (76%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420 || || || |||| || |||| ||||| |||||| || |||||||| ||||| || || Sbjct 1131606 TAGTTACCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAA 1131547 Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480 ||||| || || || |||| || ||||| || || || || || | ||||||||||| Sbjct 1131546 TCGGACAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCT 1131487 Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGA 46539 | ||| | | ||||||||| |||||| |||||| ||| | | | ||||||||| || Sbjct 1131486 GGCGGAATACCTTCCTTGTCCTGGATCTTTGTCTTGA-CGTTGTCTATCGTGTCGCTGGA 1131428 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || |||| ||||| |||||||||||||| || || || ||||| ||||| Sbjct 1131427 TTCTACTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCAT 1131374 Score = 136 bits (150), Expect = 4e-27 Identities = 136/174 (78%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| ||||||||||| || ||||| |||| |||||||| || || Sbjct 1131044 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGTTTTCCT 1130985 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| |||| |||||||||||| | || | || |||||||||| |||||| ||||| Sbjct 1130984 GCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTG 1130925 Query 46517 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | ||| | | | |||||||| || ||||| || | ||||| || ||||| || Sbjct 1130924 A-CGTTGTCAATAGTGTCGCTGGACTCCACCTCGAGGGTGATAGTCTTGCCAGT 1130872 Score = 123 bits (136), Expect = 3e-23 Identities = 137/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||| || || || || |||| |||||||| || || || || Sbjct 1131336 TCCTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCGAGCTGTTTTCCTGCAAAG 1131277 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || |||||||| | || | || |||||||||| |||||| |||||| ||| Sbjct 1131276 ATGAGACGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTT 1131218 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||||| ||||| || || | |||||||| ||||| ||||| ||||| || Sbjct 1131217 GTCGATGGTGTCGCTGGATTCGACCTCAAGAGTGATGGTCTTGCCGGTCAGAGTTTTCAC 1131158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236555909720