Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq172 122 7e-22
seq104 104 2e-16
seq74 86.0 5e-11
>seq172
Length=203
Score = 122 bits (134), Expect = 7e-22
Identities = 112/142 (79%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|| || || |||||||| |||| ||| |||||||| || || || ||||||| | ||
Sbjct 40 TTCTTGTCGAGACCATAGGCAATAGCGGCAGCAGTGGGCTCGTTGATAATTCGAAGCACG 99
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| || || | |||| | || |||||||| ||||||||||| || || ||||| ||||||
Sbjct 100 TTCAGTCCTGAAATTGTGCCGGCATCTTTGGTGGCTTGTCTCTGAGAGTCGTTGAAATAT 159
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
|||||||| || ||||| ||||
Sbjct 160 GCAGGAACTGTTATAACAGCAT 181
>seq104
Length=3444964
Score = 104 bits (114), Expect = 2e-16
Identities = 197/290 (68%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074
|| ||||| || ||||| || ||||| ||||| | ||| | || | || | | |||
Sbjct 2325778 ACGAGACGGTTGTCAAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACT 2325719
Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134
| ||| | || ||||| | | || || | ||||| ||| |||||||| | |||
Sbjct 2325718 TCGAAGATACCCTCTTCGATGGTCAGGAGGGAGACATCGAAGGTACCACCACCGAGATCG 2325659
Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194
|| || || ||||| || ||| || || || ||||| || |||| |||||||
Sbjct 2325658 AAGATGAGAACATTGCGCTCACCGTCAGCCTTCTTGTCGAGACCGTAGGCAATAGCAGCA 2325599
Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254
||||| || || || || || | | || || ||||| ||||| || || || |||
Sbjct 2325598 GCAGTGGGCTCGTTGATGATACGGAGGACGTTGAGACCGGCAATGAGACCGGCGTCCTTA 2325539
Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304
|| ||||| | || || ||||| || || ||||| ||||| || || ||
Sbjct 2325538 GTAGCTTGACGCTGGGAGTCGTTGAAGTAGGCAGGGACAGTGATGACAGC 2325489
>seq74
Length=260272
Score = 86.0 bits (94), Expect = 5e-11
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 668842 TGAAAGATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGA 668901
|| |||| ||| || |||||||||||| | || || |||||||||||||||| ||
Sbjct 122425 TGGAAGACTAAAGGGAAAAGAAGGTCGTCTCCGACAGAACCTGATGGGAAAACGTGTGGA 122366
Query 668902 TATGTCTGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGT 668961
| || || ||||| || |||||| ||||| ||| | |||| |||| ||||| ||
Sbjct 122365 CTTCTCAGCTCGTACTGTCATTACTGGCGATCCGAATCTCTCTCTTGATGAGGTTGGAGT 122306
Query 668962 TCCTCTTATTATTGC 668976
|||| ||| |||||
Sbjct 122305 TCCTATTAGCATTGC 122291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780809448320266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |