Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq104 264 1e-65 seq2 138 1e-27 seq23 125 9e-24 seq241 122 1e-22 >seq104 Length=3444964 Score = 264 bits (292), Expect = 1e-65 Identities = 472/686 (69%), Gaps = 6/686 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || || || | |||||||| |||||||| Sbjct 2325766 TCAAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACTTCGAAGATACCC 2325707 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| ||| | | | || ||||| || ||||||||||| || || || ||||| || Sbjct 2325706 TCTTCGATGGTCAGGAGGGAGACATCGAAGGTACCACCACCGAGATCGAAGATGAGAACA 2325647 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || |||| ||||| ||||||||||| || ||||| || || || || || Sbjct 2325646 TTGCGCTCACCGTCAGCCTTCTTGTCGAGACCGTAGGCAATAGCAGCAGCAGTGGGCTCG 2325587 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| || || ||||| | || || || || ||||| || Sbjct 2325586 TTGATGATACGGAGGACGTTGAGACCGGCAATGAGACCGGCGTCCTTAGTAGCTTGACGC 2325527 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || | ||| |||| |||| | ||||||| Sbjct 2325526 TGGGAGTCGTTGAAGTAGGCAGGGACAGTGATGACAGCGTTGTTGACGGTGCCACCGAGA 2325467 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || ||| | || ||| ||||| || ||||| || || || || |||| | Sbjct 2325466 TAGGCCTCGGCGGTCTCACGCATCTTGGTGAGGACCATGGAGGAGATTTCCTCAGGGGTG 2325407 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| ||| || || || || || || | | ||||| || |||| | | Sbjct 2325406 AACTGCTTCTCCTCGCCCTTGAACTCGACCTGGACGATGGGCTT-GCCGCTCTTC--TCG 2325350 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | |||||| | | | | ||||| ||| | ||||||| ||| ||||| | | Sbjct 2325349 ACAACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCGGCGTCGTTGAACTTGCGT 2325290 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || |||||||| ||||| || || ||||| | ||||||||||| |||||||| Sbjct 2325289 CCAATGAGACGCTTAGCATCGAAGACGGTGTTGATAGGGTTCATGGCGACCTGGTTCTTT 2325230 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || ||||| || | || || || || ||| | || || || || Sbjct 2325229 GCGGCATCTCCAATGAGACGCTC---GGTGTCTGTGAAGGCAACGAAGGAGGGAGTGGTG 2325173 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || |||||||| || || ||||| | |||||| | | ||| || ||||| Sbjct 2325172 CGGTTTCCCTGGTCGTTGGCGATGATTTCAATGCGGTCATCACGGAAGATACCCACGCAG 2325113 Query 8117 GAATACGTTGTTCCTAAATCAATACC 8142 || ||||| || || ||||| ||||| Sbjct 2325112 GAGTACGTGGTACCCAAATCGATACC 2325087 Score = 167 bits (184), Expect = 3e-36 Identities = 256/365 (70%), Gaps = 0/365 (0%) Strand=Plus/Minus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||| || || || ||||||||||| || | || || Sbjct 2326270 ATGGCGGCCTGGACGGCAGCACCGTAGGCAACGGCTTCATCGGGGTTGATGGACTTGTTT 2326211 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || | || || | ||| | || || || ||||| || || || Sbjct 2326210 GGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGATCTTGGGGATACGAGTAGAA 2326151 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 |||||||| | || || || | || || || |||||||| | ||| || || | Sbjct 2326150 CCACCGACGAGGACAATCTCGTGGACGGAGGACTTGTCGATCTTGGCGTCACGGAGGACT 2326091 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 |||||||| |||||| ||||| | |||| || || ||||| ||||| ||| Sbjct 2326090 CGCTCGACAGGCTCCATAGTGGAGCGGAAGAGGTCCTGGCAGAGCTCCTCGAAACGAGCA 2326031 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 ||||| ||||| || ||||| ||||| || || || | |||||||| ||||||| || Sbjct 2326030 CGGGTGATGGAGGTGTAGAAGTCAACACCCTCATAGAGAGAATCAATCTCAATGGAGGTC 2325971 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | ||||| | || ||||| || ||||| || || || || | ||| || || Sbjct 2325970 TGGGCAGCAGAAGAGAGAGTACGCTTAGCACGCTCGCAGGCAGTGCGGAGACGGCGGAGA 2325911 Query 7382 GCACG 7386 ||||| Sbjct 2325910 GCACG 2325906 >seq2 Length=824107 Score = 138 bits (152), Expect = 1e-27 Identities = 358/539 (66%), Gaps = 9/539 (2%) Strand=Plus/Plus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| ||||| || || | || ||| || | |||||| | | || ||| Sbjct 144672 TCCTCGAAACGAGCACGAGTGATCTGGGCATTGAAGTCCTCACCGTCGAAGAGAGAGTCA 144731 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 || || | ||| || || | | || | || ||||| || ||||| || || || Sbjct 144732 ATCTCGACGGTAGTCTGAGTAGCGCTGGAAAGAGTACGCTTAGCACGCTCGCAAGCAGTG 144791 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | | || ||||| | | || |||||| | ||| ||||| || || | ||| Sbjct 144792 CGGAGTCTTCGGAGGGCTCTGGAGTCACCGGAGAGATCCTTCTTGGTCTTGCGGGTGAAC 144851 Query 7427 TCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATC 7485 || | |||||| |||| |||| | | |||||||| | |||||| | || ||||| Sbjct 144852 TCCTTCTTGAAGTGGTCGA-GGAGGTTGGTGTCGAAATCCTGACCACCAAGATGGGTATC 144910 Query 7486 CCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAA 7545 || || || || ||||| |||| ||| || | ||||| | | || ||||| || Sbjct 144911 ACCGGCAGTGGCCTTGACGGTGAAGACACCGCCCTGGATGTTGAGGAGGGAGACATCGAA 144970 Query 7546 CGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGTC---GTCTTTGTTCTTA- 7600 ||||||||||| || || | ||||| || || || | || | ||| | | | Sbjct 144971 AGTACCACCACCGAGATCGTAGATGAGGACATTGCGCTCCTTCTCGGACTT--TCCAGAG 145028 Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||||| || || || || || || || || || || ||||| ||| ||| || Sbjct 145029 CCGAGACCGTAGGCAATGGCGGCAGCAGTGGGCTCGTTGATGATACGGAGAACGTTGAGA 145088 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || ||||| | | ||||| || || || |||| || ||||| |||||||| ||| Sbjct 145089 CCGGCAATGGCACCAGCATCCTTGGTGGCCTGTCTCTGGTTGTCGTTGAAGTAGGCTGGG 145148 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 || || | ||| || | | ||| |||| ||||| | | || || | |||||||| Sbjct 145149 ACAGTGATGACAGCCTTGGAGACGCTCTTTCCGAGCTTAGTCTCGGCAACCTCTTTCAT 145207 >seq23 Length=699274 Score = 125 bits (138), Expect = 9e-24 Identities = 228/328 (70%), Gaps = 7/328 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||||||||| || || || ||||| || ||| || ||| ||| Sbjct 319000 TCGAAATCTTCACCACCCAAGTGAGTGTCACCAGCGGTAGCCAAGACCTCGAAGGCACCC 319059 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||| | | || ||||| || ||||||||||| || || | | || | Sbjct 319060 TTGTCAATGGAGAGGAGAGAGACATCGAAAGTACCACCACCGAGATCGTAGACGATGA-- 319117 Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || ||||| || | ||||||||||| || ||||| || || ||||| || Sbjct 319118 -TC-TGGCGCTCGTCACCAGTCATGTCGAGACCGTAGGCAATAGCTGCGGCAGTTGGCTC 319175 Query 7636 ATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 |||| || || || ||| |||||| || || || || | || || || || || |||| Sbjct 319176 GTTAACAACACGGATGAC-GTTCAGACCGGCGATGGTACCAGCGTCCTTTGTGGCCTGTC 319234 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 || || || |||||||| ||||| || ||||| || | |||| ||| |||| Sbjct 319235 TCTGGTTGTCATTGAAGTAGGCGGGGACAGTGACGACAGCATGGCTGACAGTCTCTCCGA 319294 Query 7755 GATACGATTCCGCGATATCTTTCATTTT 7782 | ||| || ||||| || ||||| || Sbjct 319295 GGTACTTCTCGGCGATGTCCTTCATCTT 319322 >seq241 Length=1026449 Score = 122 bits (134), Expect = 1e-22 Identities = 338/514 (66%), Gaps = 7/514 (1%) Strand=Plus/Plus Query 105484 TCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGATCAGGACAAAACAATGAC 105543 || ||||||| ||||| || || | | || |||| || ||| || || | | | Sbjct 699660 TCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCATTAGGGCAGAATAGGGTC 699719 Query 105544 CAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAG 105603 |||| |||| |||||| || |||||||||||||| ||| |||||| ||| | || Sbjct 699720 CAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAAGGCCAAGAAT 699779 Query 105604 AGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGA 105663 || || || | | ||||| | || || ||| || | || || || || | Sbjct 699780 AGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAGGAACTCAAAG 699839 Query 105664 ATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTAC----GACGCCCCGC 105719 ||||| ||||||||||| || | |||| |||| | ||| || | ||| | | Sbjct 699840 ATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTTGTTGCCAC-C 699898 Query 105720 TTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGA 105779 || | ||||||||| || || ||| |||| || | ||| || | || || | ||| Sbjct 699899 CTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATTCCGTTGGA 699958 Query 105780 TGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCC 105839 | || || |||||| ||| | ||| | ||||| | | ||| |||| | || Sbjct 699959 GGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACGTTAAGACC 700018 Query 105840 AATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTC 105899 || || ||||| ||| || ||||| || | ||| ||||| ||||| || Sbjct 700019 GATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAGATACCTTC 700078 Query 105900 GATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTAC 105958 |||||| || ||||| | |||| ||||| || || | |||||| || ||| || || | Sbjct 700079 GATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGG-CTGCGGGGTTC 700137 Query 105959 CAGCATTGAACAGAGTTGGTGTTGCATGAATGAA 105992 | |||||||| ||||| || | ||||| |||| Sbjct 700138 CGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAA 700171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130727879240