Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq241 150 2e-31
seq144 109 7e-19
seq1 91.5 2e-13
>seq241
Length=1026449
Score = 150 bits (166), Expect = 2e-31
Identities = 471/718 (66%), Gaps = 16/718 (2%)
Strand=Plus/Minus
Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337
||| | || |||||| || | || || |||||||| | || | |||||||||||| ||
Sbjct 699534 TGGTACGCCATTCTCGAGGCCCAGACGGAGACTGGAAACCCCTTTATGCTTTACAAGGAT 699475
Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397
|||| |||| |||||| ||||||||||| | ||| ||| ||||| ||||| ||
Sbjct 699474 TCCTGCAACCGAAAGAGCAATCAAAAGAACCTTGGTACTATCCGTAGTTCAAACCTTTGC 699415
Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457
|| |||||| | |||| || | | ||||||| || || |||||| | || || ||
Sbjct 699414 ACTGAAATCGTTGAATACACCGCCCCAGATGAGGTTGCAGTTTGTAACTTGGCTTCTATT 699355
Query 112458 GCTCTCCCCAAGTATGTGGATCCAG-AGACAAAGACATTTGATTATGAAAAACTCCACGA 112516
|| || || | | ||||||| | | | || || |||| || |||||||| ||
Sbjct 699354 GCCCTTCCTACCTTTGTGGATGCTGTTCGCGGTGA-ATACGATTTTGGCAAACTCCATGA 699296
Query 112517 AGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT 112576
||| || | || | |||| | |||||| | ||||| | || ||||| ||
Sbjct 699295 AGTCACTCAGGTCGTTGTCAGAAACTTGAACAGAATCATTGACGGGAACCACTACCCGGT 699236
Query 112577 TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCT 112636
||| || || | ||| | | || || || |||| | | || ||||| || ||
Sbjct 699235 TGAAGAGGCACGACGAAGCAATTTCCGTCATCGCCCCATTGCTGTGGGGGTCCAGGGCCT 699176
Query 112637 CGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA 112696
|| |||| ||| | | ||| | | || || || |||||| ||| | ||
Sbjct 699175 TGCCGATGCTTTCCTCGCTCTTCGACTGCCCTTCGACTCTCCCGAAGCCAAGCTTTTGAA 699116
Query 112697 TGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA--GGCGAGTTCGGAGTTGGCA 112754
| | || || ||||| | || || || || |||| | || | | ||| ||
Sbjct 699115 CACCCAAATCTTCGAGACCCTTTACCATGCTGC-GTTGACCGCATCGTGTGAACTTGCCA 699057
Query 112755 GAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAA 112814
|||| ||||||||||| ||| |||||||||||| | ||| || || | ||||||
Sbjct 699056 -AGGTCGATGGTCCATACTCCTCCTATGAGGGTTCTCCTGTTTCTCAGGGTATTCTTCAA 698998
Query 112815 TTTGATATGTGGGAAGGTGA----GACCAAGCTTCACTACGACTGGGACGCTCTCAAGGA 112870
| ||||||| |||| || | |||| | || || |||||||| | ||| || |
Sbjct 698997 TACGATATGT-GGAACGTAACGCCGACCGACCT---CTGGGACTGGGATGGTCTTAAAGC 698942
Query 112871 ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTC 112930
||| || | ||| | |||||||| | | | || || |||||||| |||
Sbjct 698941 TGAGATCTCCAAGCACGGTGTCCGTAACAGCTTACTACTTGCGCCCATGCCAACTGCCAG 698882
Query 112931 CACCGCACA-AATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987
|||| || | |||||| | || || ||||||||||| ||||| | ||||||||
Sbjct 698881 CACCAGTCAGATTCTTGGCT-TCAACGAGTGCTTTGAACCTTACACCTCCAACATCTA 698825
Score = 131 bits (144), Expect = 2e-25
Identities = 410/630 (65%), Gaps = 19/630 (3%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|||||| | ||| | ||||| || || |||||||||| || || || |||| ||
Sbjct 700264 CCACAGCATATGATAATGCGAGTTGCCGTCGGTATCCACGGTGAGGACGTTGAGAAAGTA 700205
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730
| || |||||| | ||||||| | || |||| ||| || | || || |||||
Sbjct 700204 ATTGAAACATACAATCTCATGTCCCA-GAAATACTTCACCCATGCCTCTCCCACTCTCTT 700146
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
||| || || || || || |||||| | || ||||| |||| | ||||||||
Sbjct 700145 CAATGCCGGAACCCCGCAGCCGCAAATGGCTTCCTGCTTCCTCATTGACATGAAGGAGGA 700086
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGGG 111846
||| | || || |||| ||| |||||| ||||| || |||||| |
Sbjct 700085 CAGTATCGAAGGTATCTACGACAC----ACTGAAGACCTGTGCTTTGATTTCAAAGACTG 700030
Query 111847 CTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTA 111906
|||| || ||||| | || |||| | || | |||| | || ||| || |
Sbjct 700029 CTGGAGGAATCGGTCTTAACGTCCACCGTATCCGTGCCACCGGATCCTACATTGCTGGAA 699970
Query 111907 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 111966
| || || || | || || | || |||||||| || || ||| ||| || | |
Sbjct 699969 CCAACGGCTCCTCCAACGGAATCGTCCCCATGCTTCGTGTGTTCAACAACACTGCCAGAT 699910
Query 111967 ATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCAT 112020
|||| |||| | ||| ||||| ||| || | || |||| || |||||||
Sbjct 699909 ATGTCGACCAGGGTGGCAACAAGCGTCC--AGGTGCCTTT-GCTATCTACCTGGAGCCAT 699853
Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080
||||||| |||||| | ||||||||||| | || ||||| || | || || | |
Sbjct 699852 GGCACGCTGATATCTTTGAGTTCCTTGACCTCCGCAAGAACCATGGAAAGGAAGAAGTCC 699793
Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140
| ||| ||||| |||| || | |||| ||| ||| | ||||||||| |||||||
Sbjct 699792 GTGCCCGTGATCTATTCTTGGCCTTGTGGACTCCTGATTTGTTCATGAAGCGAGTTGAAA 699733
Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200
||| |||| ||||| | || || || || | |||| || || | | |||| | |
Sbjct 699732 AGAATGGCGATTGGACCCTATTCTGCCCTAATGAGGCTCCTGGATTGGCTGATGTCTACG 699673
Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGT 112230
| || ||||| || || | ||| |||||
Sbjct 699672 GAGAAGAGTTCGAGGCATTGTACGAAAAGT 699643
>seq144
Length=62475
Score = 109 bits (120), Expect = 7e-19
Identities = 161/226 (71%), Gaps = 8/226 (4%)
Strand=Plus/Minus
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTC-GC 102168
||||||||| || | ||||| || |||||||| || | | | ||| ||| | |
Sbjct 14639 AGTTCCATGCATCCGCAAGAAGGCCGATTGGGCCAT----TCGATGGATCCAAGATAAGA 14584
Query 102169 GTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225
|||| || || |||| || | || ||||| || |||||||| |||||| |
Sbjct 14583 ATTCCACATTCGCACAGCGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATTTTCTTCAGCG 14524
Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285
| |||||| | | || | ||||| |||||||| ||||||||||| || ||| |||||
Sbjct 14523 GCTCCTTCGCCTCCATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCCGGACTCACCTTCT 14464
Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||||| || ||||| |||||||| || || ||| || |||||
Sbjct 14463 CCAACGAACTCATCTCCCGTGACGAAGGCCTACACACTGATTTTGC 14418
>seq1
Length=4062027
Score = 91.5 bits (100), Expect = 2e-13
Identities = 217/324 (67%), Gaps = 17/324 (5%)
Strand=Plus/Plus
Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034
|| |||||||| || || | | || || | ||| ||| |||||||||||| |
Sbjct 2714327 AATCCATCCATTTCAGTGAGTATTTGATTGAGAGTGCTTTCACGTTCATCATTCCC---- 2714382
Query 16035 ATACCACCA-----GCACTGCG---TTG-CTTTCCCACGGCATCAATCTCATCAATGAAG 16085
||||||| | | | || ||| |||||| | ||||||||| || |||||||||
Sbjct 2714383 --ACCACCAAAGTTGGATTTCGATCTTGACTTTCCGATGGCATCAATTTCGTCAATGAAG 2714440
Query 16086 ACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCC 16145
| ||| ||||| |||| ||||| | |||| || || || ||||| | |||
Sbjct 2714441 ATGATACATGGGGTGTTTTTTCGAGCAATAGCAAATAGGTCGCGAACACGGGAAGGGCCA 2714500
Query 16146 ACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTAGA 16204
|| ||||| ||||||||||| || | | | || || || | |||||| ||| ||
Sbjct 2714501 ACGCCAACGAACATCTCCACGAATTCAGAGCCGCTGACGCTGTA-GAAGGGAACAGCGGA 2714559
Query 16205 TTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAG 16264
|| || ||| | || || || ||||| ||||| ||||||||| || | || |
Sbjct 2714560 CTCGCCGGCAGTCGCCTTTGCTAGTAGAGTTTTACCGGTACCTGGCGGCCCAGAAAGAAT 2714619
Query 16265 GGCACCTCGTGGAATCTTGGCGCC 16288
|| ||||| || || || || ||
Sbjct 2714620 AGCTCCTCGAGGTATTTTCGCACC 2714643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620740374827920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |