Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq241 158 1e-33 seq33 109 6e-19 >seq241 Length=1026449 Score = 158 bits (174), Expect = 1e-33 Identities = 407/617 (66%), Gaps = 5/617 (1%) Strand=Plus/Plus Query 110523 GTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACA 110582 |||||| |||| || || | |||||| ||||||| | || |||| | || || Sbjct 699650 GTACAATGCCTCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCATTAGGGCA 699709 Query 110583 GAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACAT 110642 ||| |||| ||||| ||| || ||||| | ||||||||||| |||||| |||||| Sbjct 699710 GAATAGGGTCCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAA 699769 Query 110643 CGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAA 110702 ||| |||| || |||||| ||| | ||||| | || ||||| ||| || || | Sbjct 699770 GGCCAAGAATAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAG 699829 Query 110703 AAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG--- 110759 || || | |||||| | ||||||||| || || |||| ||| | || || ||| Sbjct 699830 GAACTCAAAGATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTT 699889 Query 110760 ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAAT 110819 || |||||| ||||| | || ||| ||||| || | ||||| || | || Sbjct 699890 GTTGCCACCCTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGAT 699949 Query 110820 TCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGAT 110879 ||| | ||| || || || || ||| ||| ||||||| || ||||| Sbjct 699950 TCCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGAC 700009 Query 110880 ATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCAT 110938 | | ||| || || || || ||| ||| ||||| ||| | ||||| | | Sbjct 700010 GTTAAGACCGATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCT-TCAGTGTGTCGT 700068 Query 110939 AAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGAC 110998 | ||||| || || || |||| || |||| || ||||| |||| ||| || || Sbjct 700069 AGATACCTTCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCT 700128 Query 110999 GAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCT 111058 | || ||||| ||||||||||| || || | ||||| |||| |||||||| Sbjct 700129 GCGGGGTTCCGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGA 700188 Query 111059 TGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCA 111118 |||||||| || | | | || || | |||||| ||||| | ||||||||||| Sbjct 700189 GATTGTATGTTTCAATTACTTTCTCAACGTCCTCACCGTGGATACCGACGGCAACTCGCA 700248 Query 111119 TGAACATATATTGAGGC 111135 | | ||||| || ||| Sbjct 700249 TTATCATATGCTGTGGC 700265 >seq33 Length=639446 Score = 109 bits (120), Expect = 6e-19 Identities = 201/291 (69%), Gaps = 9/291 (3%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651 ||| ||||| | ||| |||||||||||||||| ||||||| | | | | || | Sbjct 159659 GAAGCCGTCGAGTTCGGTGAGAAGCTGGTTGAGAGTCTGTT-----TGA-CATAGGCTG- 159607 Query 11652 CATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACA 11711 ||| | | | | ||||| || | || |||| ||||||||||| | |||| Sbjct 159606 CAT--CTCGTTCGTTTCGCTTGGCGCCAATGGCATCAAGTTCATCGATGAAGATGATAGC 159549 Query 11712 CGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTAC 11771 ||| |||||||| ||||| | || |||||||| |||||||| ||||||||||| || Sbjct 159548 TGGTGCTTTGGCACGGGCCTGGGCAAACAGTTCACGGACACGCTTAGCTCCAACACCGAC 159489 Query 11772 GAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGC 11831 | | ||||| |||| | | | |||| | | ||||||||| | || ||||| Sbjct 159488 GTATATCTCGTCGAACTCGGAGCCAGACATGTAGAAGAAGGGAACGCCTGCTTCTCCAGC 159429 Query 11832 GATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAG 11882 | |||| || |||||||| ||||| || || || | ||| ||||||| Sbjct 159428 AACAGCTCTGGCAAGGAGAGTTTTACCGGTTCCGGGAGGTCCAACGAGAAG 159378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974078465800