Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq241 158 1e-33
seq33 109 6e-19
>seq241
Length=1026449
Score = 158 bits (174), Expect = 1e-33
Identities = 407/617 (66%), Gaps = 5/617 (1%)
Strand=Plus/Plus
Query 110523 GTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACA 110582
|||||| |||| || || | |||||| ||||||| | || |||| | || ||
Sbjct 699650 GTACAATGCCTCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCATTAGGGCA 699709
Query 110583 GAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACAT 110642
||| |||| ||||| ||| || ||||| | ||||||||||| |||||| ||||||
Sbjct 699710 GAATAGGGTCCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAA 699769
Query 110643 CGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAA 110702
||| |||| || |||||| ||| | ||||| | || ||||| ||| || || |
Sbjct 699770 GGCCAAGAATAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAG 699829
Query 110703 AAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG--- 110759
|| || | |||||| | ||||||||| || || |||| ||| | || || |||
Sbjct 699830 GAACTCAAAGATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTT 699889
Query 110760 ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAAT 110819
|| |||||| ||||| | || ||| ||||| || | ||||| || | ||
Sbjct 699890 GTTGCCACCCTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGAT 699949
Query 110820 TCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGAT 110879
||| | ||| || || || || ||| ||| ||||||| || |||||
Sbjct 699950 TCCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGAC 700009
Query 110880 ATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCAT 110938
| | ||| || || || || ||| ||| ||||| ||| | ||||| | |
Sbjct 700010 GTTAAGACCGATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCT-TCAGTGTGTCGT 700068
Query 110939 AAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGAC 110998
| ||||| || || || |||| || |||| || ||||| |||| ||| || ||
Sbjct 700069 AGATACCTTCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCT 700128
Query 110999 GAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCT 111058
| || ||||| ||||||||||| || || | ||||| |||| ||||||||
Sbjct 700129 GCGGGGTTCCGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGA 700188
Query 111059 TGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCA 111118
|||||||| || | | | || || | |||||| ||||| | |||||||||||
Sbjct 700189 GATTGTATGTTTCAATTACTTTCTCAACGTCCTCACCGTGGATACCGACGGCAACTCGCA 700248
Query 111119 TGAACATATATTGAGGC 111135
| | ||||| || |||
Sbjct 700249 TTATCATATGCTGTGGC 700265
>seq33
Length=639446
Score = 109 bits (120), Expect = 6e-19
Identities = 201/291 (69%), Gaps = 9/291 (3%)
Strand=Plus/Minus
Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651
||| ||||| | ||| |||||||||||||||| ||||||| | | | | || |
Sbjct 159659 GAAGCCGTCGAGTTCGGTGAGAAGCTGGTTGAGAGTCTGTT-----TGA-CATAGGCTG- 159607
Query 11652 CATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACA 11711
||| | | | | ||||| || | || |||| ||||||||||| | ||||
Sbjct 159606 CAT--CTCGTTCGTTTCGCTTGGCGCCAATGGCATCAAGTTCATCGATGAAGATGATAGC 159549
Query 11712 CGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTAC 11771
||| |||||||| ||||| | || |||||||| |||||||| ||||||||||| ||
Sbjct 159548 TGGTGCTTTGGCACGGGCCTGGGCAAACAGTTCACGGACACGCTTAGCTCCAACACCGAC 159489
Query 11772 GAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGC 11831
| | ||||| |||| | | | |||| | | ||||||||| | || |||||
Sbjct 159488 GTATATCTCGTCGAACTCGGAGCCAGACATGTAGAAGAAGGGAACGCCTGCTTCTCCAGC 159429
Query 11832 GATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAG 11882
| |||| || |||||||| ||||| || || || | ||| |||||||
Sbjct 159428 AACAGCTCTGGCAAGGAGAGTTTTACCGGTTCCGGGAGGTCCAACGAGAAG 159378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974078465800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |