Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq241 150 2e-31 seq144 102 1e-16 seq1 95.1 1e-14 >seq241 Length=1026449 Score = 150 bits (166), Expect = 2e-31 Identities = 685/1068 (64%), Gaps = 26/1068 (2%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 |||||||||||||| ||||||||||| || | ||||| | | |||||| | | Sbjct 698480 CGGAGATAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATACTGGTG 698539 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 | ||| ||| || || || || | | || | |||| ||||||||||||| Sbjct 698540 ATCTTTCCCATGGTAGGCTCTTTCAAGTGGATGTTGAGGGATTGAGACTGGTCAATGAAG 698599 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCCACACTGTGC 105767 || || | || ||||| | || | | | | | || |||||||||| || Sbjct 698600 GCGCCTCGATCAGCGGCCATCTGAACAATAG--TACGTTGAGAAATTTCCCACACGGTCT 698657 Query 105768 GGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCT 105827 ||| ||| |||||| || ||||||| | ||||| ||||| || ||||| || | Sbjct 698658 TGTACAGAGCCTTGATGTCTGCTGGGATGTTAGAGATGTTTTGGATGGAACCACCGTCGG 698717 Query 105828 TGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGA 105887 || || | | ||||||| | |||||| || || | | || || |||| | Sbjct 698718 CGATGATACGGTTTTTCATATTGTCGGACCACAGGCCGAGGTCGACCAGGTCTTTGAGAA 698777 Query 105888 G--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTC-TCAGATAGATGTTCG 105944 | ||| |||||||| ||||| || || || | | | || |||||||| | Sbjct 698778 GCCATGG--GTTGACAACTTGGAACTCGCCAGCAAGTACACGGCGTGAG-TAGATGTTGG 698834 Query 105945 TCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATT-TGTGCGGTGGAGGCTGTTGGC 106003 ||||| ||||||||||| || || | |||||| | || |||| ||| |||||| Sbjct 698835 AGGTGTAAGGTTCAAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTGCTGGCAGTTGGC 698893 Query 106004 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA 106063 || || || | | | |||||||| | ||| | | ||| | || ||| || Sbjct 698894 ATGGGCGCAAGTAGTAAGCTGTTACGGACACCGTGCTTGGAGATCTCAGCTTTAAGACCA 698953 Query 106064 TCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTG 106122 |||||||| || | | | || | || |||| ||||||| ||||||| | || || Sbjct 698954 TCCCAGTCCCAGAGGTCGGTCGGCGTTACGTTCC-ACATATCGTATTGAAGAATACCCTG 699012 Query 106123 GGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCT 106182 || |||||||||||| | | || | ||| | | | | || | |||||| Sbjct 699013 AGAAACAGGAGAACCCTCATAGGAGGAGTATGGACCATCGACCTTGGCAAGTTCACACGA 699072 Query 106183 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 106242 || || | || || || | ||| || ||||| | | |||| ||||||||| Sbjct 699073 TGCGGTCAACGCAGCATGGTAAAGGGTCTCGAAGATTTGGGTGTTCAAAAGCTTGGCTTC 699132 Query 106243 ATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCA 106301 || || || | | || | | | | || |||| || || || || || |||| Sbjct 699133 GGGAGAGTCGAAGG-GCAGTCGAAGAGCGAGGAAAGCATCGGCAAGGCCCTGGACCCCCA 699191 Query 106302 AACCAATAGGTCTGTGTCGCATATTAGACTT--TCGCGCAGTCTCAACGGGATAAAAATT 106359 | |||| || | || || | ||| ||| ||| || ||||| || || || Sbjct 699192 CAGCAATGGGGCGATGACGGAAATTG--CTTCGTCGTGCCTCTTCAACCGGGTAGTGGTT 699249 Query 106360 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 106419 | |||||||| || ||| | ||| || ||| | || |||| |||||| ||||| | Sbjct 699250 CCCGTCAATGATTCTGTTCAAGTTTCTGACAACGACCTGAGTGACTTCATGGAGTTTGCC 699309 Query 106420 ATAATCAAA---AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAA 106476 | |||| | | |||| | ||| ||| | | |||||||| || || ||||| Sbjct 699310 AAAATCGTATTCACCGCGAA---CAGCATCCACAAAGGTAGGAAGGGCAATAGAAGCCAA 699366 Query 106477 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGA 106536 || ||||| || |||||| | ||||| || | ||||| || || | ||| || Sbjct 699367 GTTACAAACTGCAACCTCATCTGGGGCGGTGTATTCAACGATTTCAGTGCAAAGGTTTGA 699426 Query 106537 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAG 106596 ||| || || || | |||||||| || |||||| |||||| | ||||||||| || Sbjct 699427 ACTACGGATAGTACCAAGGTTCTTTTGATTGCTCTTTCGGTTGCAGGAATCCTTGTAAAG 699486 Query 106597 CATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||| |||| | || ||||||||||| | || |||||| || | ||| Sbjct 699487 CATAAAGGGGTTTCCAGTCTCCGTCTGGGCCTCGAGAATGGCGTACCA 699534 Score = 118 bits (130), Expect = 1e-21 Identities = 363/556 (65%), Gaps = 13/556 (2%) Strand=Plus/Plus Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || ||||| || | ||| | ||| || ||||| ||||||||||| | || ||| || Sbjct 699705 GGGCAGAATAGGGTCCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTC 699764 Query 106814 CACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 |||| || | || ||||| | ||| || | ||||| | || ||||| || | Sbjct 699765 CACAAGGCCAAGAATAGATCACGGGCACGGA-CTTCTTCCTTTCCATGGTTCTTGCGGAG 699823 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTT 106932 ||||||||||| | |||||| |||||||||||||| || |||| || | | || Sbjct 699824 GTCAAGGAACTCAAAGATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACC--- 699880 Query 106933 TCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 106986 | ||||| ||| | || | ||||| | || ||| ||| || || |||||||| Sbjct 699881 TGGACGCTTGTTGCCACCCTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCAT 699940 Query 106987 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 107046 || | || || | || || || || || ||| ||| |||| | | Sbjct 699941 GGGGACGATTCCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGAT 700000 Query 107047 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 | |||| || | || || || ||||| |||||| || ||||| | | || Sbjct 700001 ACGGTGGACGTTAAGACCGATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAG 700060 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166 || | |||||||| | ||| ||||||||| || | || |||||||| | ||| Sbjct 700061 TGTGTCGTAGATACCTTCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCAT 700120 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTT 107225 ||||| || || || ||||||||||| || || | || || |||| || | | Sbjct 700121 TTGCGGCTGCGGGGTTCCGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTC-T 700179 Query 107226 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGG 107285 ||||||| | |||||| || | || |||| ||| || |||||||| |||| || Sbjct 700180 GGGACATGAGATTGTATGTTTCAATTACTTTCTCAACGTCCTCACCGTGGATACCGACGG 700239 Query 107286 CCACACGCATAAACAT 107301 | || ||||| | ||| Sbjct 700240 CAACTCGCATTATCAT 700255 >seq144 Length=62475 Score = 102 bits (112), Expect = 1e-16 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| || || || || ||||| || ||||| || |||||| || || Sbjct 14417 GGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCC 14476 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||||| ||| | || | | ||| || ||| |||||| || Sbjct 14477 GGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAAAT 14536 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431 |||||| || ||||| |||| |||||||| ||||| Sbjct 14537 ACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGTGCGAA 14575 >seq1 Length=4062027 Score = 95.1 bits (104), Expect = 1e-14 Identities = 195/286 (68%), Gaps = 17/286 (6%) Strand=Plus/Plus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 || |||||||| || || | | ||| || | ||| ||| |||||||||||| | Sbjct 2714327 AATCCATCCATTTCAGTGAGTATTTGATTGAGAGTGCTTTCACGTTCATCATTCCC---- 2714382 Query 9342 ATACCACCA-----GCACTGCG---TTG-CTTTCCCACGGCATCAATCTCATCAATGAAG 9392 ||||||| | | | || ||| |||||| | ||||||||| || ||||||||| Sbjct 2714383 --ACCACCAAAGTTGGATTTCGATCTTGACTTTCCGATGGCATCAATTTCGTCAATGAAG 2714440 Query 9393 ACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCC 9452 | |||||||| |||| || || || |||| || |||||||| | | ||| Sbjct 2714441 ATGATACATGGGGTGTTTTTTCGAGCAATAGCAAATAGGTCGCGAACACGGGAAGGGCCA 2714500 Query 9453 ACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTAGA 9511 || ||||| ||||||||||| || | | | || || || | |||||| ||| || Sbjct 2714501 ACGCCAACGAACATCTCCACGAATTCAGAGCCGCTGACGCTGTA-GAAGGGAACAGCGGA 2714559 Query 9512 TTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 9557 || || ||| | || || || ||||| ||||| ||||||||| Sbjct 2714560 CTCGCCGGCAGTCGCCTTTGCTAGTAGAGTTTTACCGGTACCTGGC 2714605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978875187640