Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq210 138 3e-27 seq104 104 5e-17 >seq210 Length=1335347 Score = 138 bits (152), Expect = 3e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||| || || ||||| || ||||| || | || || | || || ||| Sbjct 1131354 ACAAGGTGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCG 1131295 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || ||||| ||||| || ||||| ||||||||||| ||||| || ||||| || Sbjct 1131294 AGCTGTTTTCCTGCAAAGATGAGACGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGG 1131235 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| ||| || ||||| || | ||||| Sbjct 1131234 ATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGATTCGACCTCAAGAGTGATGGTCTTG 1131175 Query 195112 CCTGTCAAAGTTTTTACGA 195130 || |||| |||||| |||| Sbjct 1131174 CCGGTCAGAGTTTTCACGA 1131156 Score = 111 bits (122), Expect = 3e-19 Identities = 138/187 (74%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||| ||| || || || ||||| |||| || || | || || ||| Sbjct 1131056 ACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 1130997 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || ||||||||||| || || || |||||||| || ||||| || ||||| || Sbjct 1130996 AGCTGTTTTCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 1130937 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 || || ||||||||| ||||| |||| | | || ||||| || ||||| | |||| Sbjct 1130936 ATCTTGGTCTTGACGTTGTCAATAGTGTCGCTGGAC--TCCACCTCGAGGGTGATAGTCT 1130879 Query 195110 TTCCTGT 195116 | || || Sbjct 1130878 TGCCAGT 1130872 >seq104 Length=3444964 Score = 104 bits (114), Expect = 5e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| |||||||| || ||||| ||||| || | |||||| | || || || Sbjct 1585642 ACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCGTCCTCA 1585701 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||||| || ||||||||||| || || || |||||||| ||||| || || |||||| Sbjct 1585702 AGCTGTTTTCCTGCGAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCT 1585758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477889824187