Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq210 138 3e-27
seq104 104 5e-17
>seq210
Length=1335347
Score = 138 bits (152), Expect = 3e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| ||||| || || ||||| || ||||| || | || || | || || |||
Sbjct 1131354 ACAAGGTGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCG 1131295
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || ||||| ||||| || ||||| ||||||||||| ||||| || ||||| ||
Sbjct 1131294 AGCTGTTTTCCTGCAAAGATGAGACGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGG 1131235
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || |||||||| ||| || ||||| || | |||||
Sbjct 1131234 ATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGATTCGACCTCAAGAGTGATGGTCTTG 1131175
Query 195112 CCTGTCAAAGTTTTTACGA 195130
|| |||| |||||| ||||
Sbjct 1131174 CCGGTCAGAGTTTTCACGA 1131156
Score = 111 bits (122), Expect = 3e-19
Identities = 138/187 (74%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || ||| ||| || || || ||||| |||| || || | || || |||
Sbjct 1131056 ACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 1130997
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || ||||||||||| || || || |||||||| || ||||| || ||||| ||
Sbjct 1130996 AGCTGTTTTCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 1130937
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109
|| || ||||||||| ||||| |||| | | || ||||| || ||||| | ||||
Sbjct 1130936 ATCTTGGTCTTGACGTTGTCAATAGTGTCGCTGGAC--TCCACCTCGAGGGTGATAGTCT 1130879
Query 195110 TTCCTGT 195116
| || ||
Sbjct 1130878 TGCCAGT 1130872
>seq104
Length=3444964
Score = 104 bits (114), Expect = 5e-17
Identities = 93/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| |||||||| || ||||| ||||| || | |||||| | || || ||
Sbjct 1585642 ACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCGTCCTCA 1585701
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
||||| || ||||||||||| || || || |||||||| ||||| || || ||||||
Sbjct 1585702 AGCTGTTTTCCTGCGAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCT 1585758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109477889824187
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |