Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq241 138 1e-27
>seq241
Length=1026449
Score = 138 bits (152), Expect = 1e-27
Identities = 445/688 (65%), Gaps = 2/688 (0%)
Strand=Plus/Plus
Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184
||| || || || || || |||| | | || |||||| |||||||| || | | |
Sbjct 699659 CTCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCATTAGGGCAGAATAGGGT 699718
Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244
|||||| ||| |||| |||| |||| || | ||| || |||| | || | ||
Sbjct 699719 CCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAAGGCCAAGAA 699778
Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304
|| ||| | | | | |||||| || ||| ||| | || ||||| || || |
Sbjct 699779 TAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAGGAACTCAAA 699838
Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364
|||||||| |||||||| || | || || || | ||||||| || || || || ||
Sbjct 699839 GATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTTGTTGCCACC 699898
Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424
|| || | |||||||||||| ||||| | || | | ||| ||||| || || || ||
Sbjct 699899 CTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATTCCGTTGGA 699958
Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACC 48484
|| |||||||| | ||| || ||| | || | ||| | || |||
Sbjct 699959 GGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACGTTAAGACC 700018
Query 48485 TATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTC 48544
|| || || || | || || || | |||||| || || || || || || |||||
Sbjct 700019 GATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAGATACCTTC 700078
Query 48545 TATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCC 48604
||||| || || |||| | | || || || || ||||||||| || |||||
Sbjct 700079 GATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGCGGGGTTCC 700138
Query 48605 TGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGT 48664
| ||| || | || ||||| ||||| | || |||||| || | | || |||||
Sbjct 700139 GGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGATTGTATGT 700198
Query 48665 TTCAATAACAGAATCTATATCC-CATTGATGTATACCTATAGATACACGCATTAACATAT 48723
|||||| || || | ||| || | || ||||| | | || ||||||| |||||
Sbjct 700199 TTCAATTACTTTCTCAACGTCCTCACCG-TGGATACCGACGGCAACTCGCATTATCATAT 700257
Query 48724 ATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTT 48783
|| || | |||| ||| ||| || || | || ||||| |||| | || |
Sbjct 700258 GCTGTGGCCGTTCAGCAACCTTGCCGTTGGTTCGTAGCAGGTATGACCTTTCAAGCGTCT 700317
Query 48784 TAAAACCAAAATAGTTGTATGAAAAGTC 48811
| || || ||||| | ||| ||||||
Sbjct 700318 TGAAGCCGAAATACTGGTAGTTAAAGTC 700345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562106966120040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |