Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq144 138 2e-27
seq241 111 3e-19
>seq144
Length=62475
Score = 138 bits (152), Expect = 2e-27
Identities = 346/519 (67%), Gaps = 15/519 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | ||||| |||||||| ||||| || | | ||||| || ||
Sbjct 14126 CTGGTAATCTCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGGGAGATATTGTC 14185
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||||||||||| ||||| || | | | ||| | || | | ||
Sbjct 14186 CATGAAGTCGAAGGGGTTGGTGGTGTTGTAGAACTTCTTGTTA--CCAAGAGCAACGAGA 14243
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
|| ||| |||||| |||| ||||| | ||||||| | |||||||| | |||
Sbjct 14244 AGCCTATCGGCGACGAACTCAATGTACTGGCACATGAGCTTAGCATTCATGCCGAGAAGG 14303
Query 48017 GACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075
| ||| ||| | || | || | ||||||| ||| || || ||||| | ||
Sbjct 14304 G-CACAGGGGAGGGCATCGGTCAAGAACTCCTGCTCGATGGTGACTGCTTCAGTGATGAT 14362
Query 48076 CTGCTTAACG---CGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132
|| ||| | || || | | | |||| ||||| | | || | |||
Sbjct 14363 GGCCTCAACAGCACTGGGGTCAGGACGATAGTTG---AGGTGAGAGA---ACAGAAGGCA 14416
Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192
|||||| || |||| | ||||||||| ||| |||||| ||||||||||| ||| ||
Sbjct 14417 GGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCC 14476
Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252
||||||| || | || || |||||||| || | ||||| ||||| |||||| ||
Sbjct 14477 GGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAAAT 14536
Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312
||||| || || || || || || | || | |||| | | ||||| ||| |||
Sbjct 14537 ACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGTGCGAATGTGGAATTCTTATCTTGGAT 14596
Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
||| || ||||| || |||||||| |||||||||
Sbjct 14597 CCATCGAATGGCCCAATCGGCCTTCTTGCGGATGCATGG 14635
>seq241
Length=1026449
Score = 111 bits (122), Expect = 3e-19
Identities = 143/197 (73%), Gaps = 3/197 (2%)
Strand=Plus/Plus
Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932
|| ||| |||| ||| ||||| || || || || |||||||| || |||||||| |||
Sbjct 699798 TCTTCCTTTCCATGGTTCTTGCGGAGGTCAAGGAACTCAAAGATATCAGCGTGCCATGGC 699857
Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCC 213989
|||| |||||| |||||||| || || | |||| || |||||||| || |||||
Sbjct 699858 TCCAGGTAGATAGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACATATCTGGCA 699917
Query 213990 ACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCT 214049
||||||| | || || | ||| || | |||||||| ||||||||||| ||
Sbjct 699918 GTGTTGTTGAACACACGAAGCATGGGGACGATTCCGTTGGAGGAGCCGTTGGTTCCAGCA 699977
Query 214050 ATATACGAGCCGGAGGC 214066
|| || || |||| |||
Sbjct 699978 ATGTAGGATCCGGTGGC 699994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931529760874240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |