Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq84 98.7 1e-15 >seq84 Length=240715 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 139282 CTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTG 139341 |||| ||||| | ||||| |||||||| ||||| || || ||||||||||| ||||| | Sbjct 37619 CTGCGTAGAAGGCCGACATGTTTGCGAGAAGTGCCTGAGCAGTGCAGATGTTGCTGGTAG 37560 Query 139342 CTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGC 139401 | || || | | ||||||||| || | || || || || | | | ||| | || | Sbjct 37559 CCTTCTCGCGACGAATATGCTGTTCACGGGTCTGCAGGGCAAGACGCAAGGCACGGTTTC 37500 Query 139402 CTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTG 139461 | |||||| || ||| || || | |||||| ||||||| ||| | || || | Sbjct 37499 CAAGTCTGTCCTTGGAGACACCGACTATACGGCCAGGAATCTTTCGCTTGTGTTTCTCGG 37440 Query 139462 TTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCAAA 139513 | |||||||| ||||| || || || || | ||||| || | ||| || Sbjct 37439 TGCAAGCAAAGAAGGCAGCCTGGGGGCCGCCAAAGCCCATGGGGACACCGAA 37388 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| |||||||| || || || ||||| || | | || || || || | || | || Sbjct 37015 CATGGCCTCTGCGGCGGCGGTAGCTTCGTCGAGAACGGAGGCATTGGCAACAGGCAGACC 36956 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || | | | || || ||| | |||| | || || | | |||||| || Sbjct 36955 GGTCAGGTCAGAGGTAAGGGTCTGGAAGTTGAGAAGAGACTCGAGACGGCCCTGACTGAT 36896 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 ||| | || || |||||||| |||||||| | || ||||| || || |||||||| Sbjct 36895 CTCGGGCTGGTAAGGAGTGTAGCTGGTGTACCAGATGGGGTTCTCGAGGACATTTCGCTG 36836 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCC 140071 ||||| ||||| ||||| ||||||||||| Sbjct 36835 GATGACCGGGGGCACGATGGTACCATAGTATCC 36803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996511017720