Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq241 105 2e-17
seq74 91.5 4e-13
>seq241
Length=1026449
Score = 105 bits (116), Expect = 2e-17
Identities = 356/554 (64%), Gaps = 3/554 (1%)
Strand=Plus/Plus
Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038
|| || ||||| || || || | ||| || ||||||| || ||||||||| ||
Sbjct 699807 CCATGGTTCTTGCGGAGGTCAAGGAACTCAAAGATATCAGCGTGCCATGGCTCCAGGTAG 699866
Query 156039 ATAGCAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTG 156095
|||||||| ||| | | | ||||||||||| || ||||| | ||||| || |||
Sbjct 699867 ATAGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACATATCTGGCAGTGTTGTTG 699926
Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155
|| |||| ||||| || | || || ||||| | ||| |||||||| ||| | ||
Sbjct 699927 AACACACGAAGCATGGGGACGATTCCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGAT 699986
Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215
|| | | || | | || | | || || || || || | || ||||| |
Sbjct 699987 CCGGTGGCACGGATACGGTGGACGTTAAGACCGATTCCTCCAGCAGTCTTTGAAATCAAA 700046
Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275
|| || ||| | || | | | |||||||| ||| || || | ||| | ||
Sbjct 700047 GCACAGGTCTTCAGTGTGTCGTAGATACCTTCGATACTGTCCTCCTTCATGTCAATGAGG 700106
Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335
|||| ||| | ||| || | || ||||| || ||||| || || || | |||||
Sbjct 700107 AAGCAGGAAGCCATTTGCGGCTGCGGGGTTCCGGCATTGAAGAGAGTGGGAGAGGCATGG 700166
Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCG 156395
| || || || | ||||| || |||||| || | | ||||||| | |||
Sbjct 700167 GTGAAGTATTTCTGGGACATGAGATTGTATGTTTCAATTACTTTCTCAACGTCCTCACCG 700226
Query 156396 TGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCA 156455
|| |||| || | || | ||| ||||||||| || || || ||| | || |
Sbjct 700227 TGGATACCGACGGCAACTCGCATTATCATATGCTGTGGCCGTTCAGCAACCTTGCCGTTG 700286
Query 156456 ATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCA 156515
|||| || ||||||| | ||| || || || || |||||||| | | ||| |||
Sbjct 700287 GTTCGTAGCAGGTATGACCTTTCAAGCGTCTTGAAGCCGAAATACTGGTAGTTAAAGTCA 700346
Query 156516 CGGTTGTAATCAAT 156529
|||| ||| ||||
Sbjct 700347 CGGTCGTACACAAT 700360
>seq74
Length=260272
Score = 91.5 bits (100), Expect = 4e-13
Identities = 169/248 (68%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655
||||| ||||||||||| | ||||| ||||| || ||||| | ||| | ||||||
Sbjct 120869 CGCTGGATATAACCAGTCTCCGCAGTTTTGACAGCAGTGTCAATCAAACCTTCGCGACCA 120928
Query 302656 CCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACG 302715
||||||| |||||||| | || ||| || || | | | | ||| |||| |||
Sbjct 120929 GCCATAGCGTGGAAGAAGAATTCGGTGGGTGTCAGTCCACGGAGATACGAGTTCTCGACG 120988
Query 302716 AAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCA 302775
|| ||||| | || || |||| || || || || ||||||| |||| | | |
Sbjct 120989 AATCCACGAGATTCTGGAGAATAATCATCTTTTGTGAAATGTGGCAATGTCCGATATTTA 121048
Query 302776 TAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGC 302835
| ||| | || ||||||||||| ||||| ||| || || | || |||||||
Sbjct 121049 AATCCGAAAGGAATACGCTTTCCTTCAACTGACTGTTGACCGACTACCGCTGTCATCTGA 121108
Query 302836 GAAATATT 302843
||||| ||
Sbjct 121109 GAAATGTT 121116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471812678149957
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |