Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq241 132 8e-25
seq221 131 3e-24
seq144 107 3e-17
seq210 105 1e-16
>seq241
Length=1026449
Score = 132 bits (146), Expect = 8e-25
Identities = 184/258 (71%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||||||||| | || |||| ||| || || || |||||||| || | ||||||||
Sbjct 699899 CTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATTCCGTTGGA 699958
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||||||| || || | ||||| || | ||| || | ||| || || ||
Sbjct 699959 GGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACGTTAAGACC 700018
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || || || | ||| || || | || || | ||||| || |||||||| || ||
Sbjct 700019 GATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAGATACCTTC 700078
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| ||| |||||||||| | || ||||| || | ||||||| ||| || ||
Sbjct 700079 GATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGCGGGGTTCC 700138
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
|||||||||||| |||||
Sbjct 700139 GGCATTGAAGAGAGTGGG 700156
>seq221
Length=1318375
Score = 131 bits (144), Expect = 3e-24
Identities = 98/115 (85%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| ||||||||||||||||||||| || | ||||| | || ||||||||||| || |||
Sbjct 826587 GCTGCCAACTACCTCGACATCAAGGCCTTGCTCGACGTTGGATGCAAGACCGTCGCAAAC 826646
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||||||||| |||||||| |||||||||||||| |||||| || |||
Sbjct 826647 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 826701
>seq144
Length=62475
Score = 107 bits (118), Expect = 3e-17
Identities = 167/235 (71%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| || || || ||| |||||| |||||||||||||| |||| ||||| |||||
Sbjct 14130 TAATCTCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGGGAGATATTGTCCATG 14189
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG-CACC-CGAGCGACGCAAGCAGGC 794025
| ||| ||||||| || |||| ||||| | ||| |||| ||| || || |
Sbjct 14190 AAGTCGAAGGGGTTGGTGGTGTTGTAGAACTTCTTGTTACCAAGAGCAACG--AGAAGCC 14247
Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085
||||||||||| |||||||||||||||||||| || |||||||||| || ||
Sbjct 14248 TATCGGCGACGAACTCAATGTACTGGCACATGAGCTTAGCATTCATGCCGAGAAGGGCAC 14307
Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140
||| || | ||| | | ||||| | |||||| ||| || || |||||||
Sbjct 14308 AGGGGAGGGCATCGGTCAAGAACTCCTGCTCGATGGTGACTGCTTCAGTGATGAT 14362
Score = 89.7 bits (98), Expect = 8e-12
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|||||||| || ||| | ||||||| ||| ||| ||||||||||| || ||||||
Sbjct 14436 CCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGGCATGAGACCACGCTTC 14495
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|| ||||| ||||||| ||| ||| ||| || || ||||||||||| ||||||
Sbjct 14496 TTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAAATACCCTCGACGGCAGCAAAG 14555
Query 794461 CCGACGAGCCGCTCGGCAAAAGTG 794484
| || || |||| || || |||
Sbjct 14556 GCAACAAGGCGCTGTGCGAATGTG 14579
>seq210
Length=1335347
Score = 105 bits (116), Expect = 1e-16
Identities = 85/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| || || ||||| |||||| |||||||||| ||| |||
Sbjct 195810 GTACTTGGTGACGGCCTTGGTGCCTTCAGAGACAGCGTGCTTGGCCAGTTCACCGGGCAG 195869
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTG 1485573
||| || || |||| |||||| ||||| | |||| ||| |||
Sbjct 195870 GATGAGACGGACGGAGGTCTGAATCTCTCTGGTGGAGATGGTG 195912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916218636239579
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |