Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq210 123 2e-23
seq104 98.7 6e-16
>seq210
Length=1335347
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
|| || || | ||||| ||| |||| || | |||||||||||||| |||||||| ||
Sbjct 1131603 TTACCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAATCG 1131544
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867
|| || | || | || || || || ||||| || ||||| || || ||||||||| ||
Sbjct 1131543 GACAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGC 1131484
Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927
|| | || |||||||| | || ||| |||||| |||||| || ||| ||
Sbjct 1131483 GGAATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCTATCGTGTCGCTGGATTCT 1131424
Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || | || || || || ||||| || ||||| || ||||||||||||
Sbjct 1131423 ACTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCATG 1131373
Score = 118 bits (130), Expect = 7e-22
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||||||||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 1131059 AGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1131000
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || ||||| ||||||||||| || ||||||||| | || | |||||||||||
Sbjct 1130999 TCGAGCTGTTTTCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 1130940
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || ||| ||| || || | ||| || |||
Sbjct 1130939 TGGATCTTGGTCTTGACGTTGTCAATAGTGTCGCTGGACTCCACCTCGAGGGTGATAGTC 1130880
Query 34946 TTTCCCGTGA 34955
|| || ||||
Sbjct 1130879 TTGCCAGTGA 1130870
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || ||||| || ||||| |||||||| ||| | || | ||
Sbjct 1131357 AGGACAAGGTGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 1131298
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || ||||| || ||||| || |||||||||||| | || | |||||||||||
Sbjct 1131297 TCGAGCTGTTTTCCTGCAAAGATGAGACGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCC 1131238
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || ||| ||||| |||| || ||||||
Sbjct 1131237 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGATTCGACCTCAAGAGTGATGGTC 1131178
Query 34946 TTTCCCGTGAGGGTCTTTAC 34965
|| || || || || || ||
Sbjct 1131177 TTGCCGGTCAGAGTTTTCAC 1131158
>seq104
Length=3444964
Score = 98.7 bits (108), Expect = 6e-16
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| |||| ||||||||||||||| ||||| || || | || | ||
Sbjct 1585639 AGCACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCGTCC 1585698
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || || ||||| ||||||||||| || ||||||||| | || | |||||||||||
Sbjct 1585699 TCAAGCTGTTTTCCTGCGAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTC 1585757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325691763991559
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |